RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PMF1Q6P1K2 205 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 WDR5BQ86VZ2 330 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 UNC45BQ8IWX7 931 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 TSTD1Q8NFU3 115 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 KCNV2Q8TDN2 545 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 STK32AQ8WU08 396 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 EDEM1Q92611 657 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 FAM149B1Q96BN6 582 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 MED15Q96RN5 788 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 CEP250Q9BV73 2442 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 POLMQ9NP87 494 aaPredicted RBP14.79□□□□□ -0.04
LIG1-218ENST00000599322 DNAJC17Q9NVM6 304 aaKnown RBP14.79□□□□□ -0.04
LIG1-218ENST00000599322 GPR179Q6PRD1 2367 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 MYO16Q9Y6X6 1858 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 YJEFN3A6XGL0 299 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 E7ENQ6 273 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 PIK3R2O00459 728 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 LILRB5O75023 590 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 TULP3O75386 442 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 LTFP02788 710 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 TYRP14679 529 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 RAPGEF1Q13905 1077 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 GJB7Q6PEY0 223 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 DENND1CQ8IV53 801 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 FMNL3Q8IVF7 1028 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
LIG1-218ENST00000599322 USP33Q8TEY7 942 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 PCMTD1Q96MG8 357 aaPredicted RBP14.78□□□□□ -0.04
LIG1-218ENST00000599322 DDX50Q9BQ39 737 aaKnown RBP14.78□□□□□ -0.04
LIG1-218ENST00000599322 EPC1Q9H2F5 836 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 SYNCQ9H7C4 482 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
LIG1-218ENST00000599322 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
LIG1-218ENST00000599322 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
LIG1-218ENST00000599322 TYW5A2RUC4 315 aaKnown RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 K7ESF4 209 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 AXIN1O15169 862 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 NCAM1P13591 858 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 PTMSP20962 102 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 TIE1P35590 1138 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 GPD2P43304 727 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 SLC11A2P49281 568 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 DGKGP49619 791 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 DGKEP52429 567 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 MYL5Q02045 173 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 MPPE1Q53F39 396 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 C10orf76Q5T2E6 689 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 NAIF1Q69YI7 327 aaPredicted RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 RBM43Q6ZSC3 357 aaKnown RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 IPO4Q8TEX9 1081 aaKnown RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 DDI1Q8WTU0 396 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 UCMAQ8WVF2 138 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 SHC3Q92529 594 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 NDRG1Q92597 394 aaKnown RBP14.77□□□□□ -0.05
LIG1-218ENST00000599322 VPS16Q9H269 839 aa14.77□□□□□ -0.05
LIG1-218ENST00000599322 A0A0A0MRY4 1105 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 MED19A0JLT2 244 aaPredicted RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 K7EQS6 105 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 CACNG3O60359 315 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 RPP40O75818 363 aaKnown RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 KLF8O95600 359 aaPredicted RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 LATS1O95835 1130 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 TDGF1P13385 188 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 ARID5AQ03989 594 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 BYSLQ13895 437 aaKnown RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 USP39Q53GS9 565 aaKnown RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 LAIR1Q6GTX8 287 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 DENND1BQ6P3S1 775 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 Q6ZNB5 142 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 C11orf74Q86VG3 221 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 SCUBE3Q8IX30 993 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 PGBD3Q8N328 593 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 CPXM2Q8N436 756 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 CCDC33Q8N5R6 958 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 ZNF513Q8N8E2 541 aaPredicted RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 ZNF557Q8N988 423 aaPredicted RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 TERB1Q8NA31 727 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 MSANTD4Q8NCY6 345 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 BHMTQ93088 406 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 WBP2Q969T9 261 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 SERPINB11Q96P15 392 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 HHIPQ96QV1 700 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 LSM14BQ9BX40 385 aaKnown RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 TAB2Q9NYJ8 693 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 BCCIPQ9P287 314 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIG1-218ENST00000599322 SFMBT1Q9UHJ3 866 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 SLC12A6Q9UHW9 1150 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 AGO1Q9UL18 857 aaKnown RBP14.76□□□□□ -0.05
LIG1-218ENST00000599322 MMP17Q9ULZ9 603 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
LIG1-218ENST00000599322 CALCAP01258 141 aa14.75□□□□□ -0.05
LIG1-218ENST00000599322 PXNP49023 591 aaPredicted RBP14.75□□□□□ -0.05
LIG1-218ENST00000599322 TBX4P57082 545 aa14.75□□□□□ -0.05
LIG1-218ENST00000599322 TRIP4Q15650 581 aaPredicted RBP14.75□□□□□ -0.05
LIG1-218ENST00000599322 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
LIG1-218ENST00000599322 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
LIG1-218ENST00000599322 MSANTD2Q6P1R3 559 aa14.75□□□□□ -0.05
LIG1-218ENST00000599322 PKN3Q6P5Z2 889 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms