RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 CALR3Q96L12 384 aaKnown RBP16.61■□□□□ 0.25
LTBP4-222ENST00000598256 CNPY3Q9BT09 278 aa16.61■□□□□ 0.25
LTBP4-222ENST00000598256 S1PR5Q9H228 398 aa16.61■□□□□ 0.25
LTBP4-222ENST00000598256 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
LTBP4-222ENST00000598256 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
LTBP4-222ENST00000598256 SYNJ2BP-COX16A0A087WUM0 186 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 H3BQ06 376 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 MDM4O15151 490 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 COCHO43405 550 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 RNF8O76064 485 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 TRUB2O95900 331 aaKnown RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 CKMP06732 381 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 CEBPBP17676 345 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 KCNA5P22460 613 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 PITX1P78337 314 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 ZNF252P-AS1Q0IIN9 211 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 SLC25A52Q3SY17 297 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 STXBP5Q5T5C0 1151 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 RNF10Q8N5U6 811 aaKnown RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 SMRP1Q8NCR6 262 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 TPCN2Q8NHX9 752 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 ADAM32Q8TC27 787 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 TBCBQ99426 244 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 NPY6RQ99463 290 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 WDR6Q9NNW5 1121 aaKnown RBP16.6■□□□□ 0.25
LTBP4-222ENST00000598256 MARCH2Q9P0N8 246 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 COX16Q9P0S2 106 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 SFMBT1Q9UHJ3 866 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 USTQ9Y2C2 406 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 MUC6Q6W4X9 2439 aa16.6■□□□□ 0.25
LTBP4-222ENST00000598256 NRG2O14511 850 aaPredicted RBP16.59■□□□□ 0.25
LTBP4-222ENST00000598256 IRAK2O43187 625 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 MSI1O43347 362 aaKnown RBP16.59■□□□□ 0.25
LTBP4-222ENST00000598256 MOSPD3O75425 235 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 TBX18O95935 607 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 PFKLP17858 780 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 HDCP19113 662 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 TFE3P19532 575 aaPredicted RBP16.59■□□□□ 0.25
LTBP4-222ENST00000598256 GBP1P32455 592 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 DEUP1Q05D60 604 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 NME3Q13232 169 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 CCDC14Q49A88 953 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 DAAM2Q86T65 1068 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 C17orf53Q8N3J3 647 aaPredicted RBP16.59■□□□□ 0.25
LTBP4-222ENST00000598256 ARL14EPQ8N8R7 260 aaPredicted RBP16.59■□□□□ 0.25
LTBP4-222ENST00000598256 ITFG1Q8TB96 612 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 FAM172AQ8WUF8 416 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 ALS2CR12Q96Q35 445 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 TASP1Q9H6P5 420 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 C11orf16Q9NQ32 467 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 DDIT4Q9NX09 232 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 CAPN6Q9Y6Q1 641 aa16.59■□□□□ 0.25
LTBP4-222ENST00000598256 SLC12A8A0AV02 714 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 PROSCO94903 275 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 OLFM2O95897 454 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 AVPR1AP37288 418 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 ACAP1Q15027 740 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 OTUD1Q5VV17 481 aaPredicted RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 C11orf63Q6NUN7 778 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 KLHDC10Q6PID8 442 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.242e-9■■■■□ 19.3
LTBP4-222ENST00000598256 STRADAQ7RTN6 431 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 HLA-CQ95604 372 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 KCND1Q9NSA2 647 aa16.58■□□□□ 0.24
LTBP4-222ENST00000598256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
LTBP4-222ENST00000598256 KIF26AQ9ULI4 1882 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-222ENST00000598256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-222ENST00000598256 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 SPOPO43791 374 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 KIF5CO60282 957 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 PALMO75781 387 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 MAN1A1P33908 653 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 TBX4P57082 545 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 NNTQ13423 1086 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 SMAD4Q13485 552 aaKnown RBP16.57■□□□□ 0.24
LTBP4-222ENST00000598256 CBX2Q14781 532 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-222ENST00000598256 TRIP4Q15650 581 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-222ENST00000598256 SH3PXD2AQ5TCZ1 1133 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
LTBP4-222ENST00000598256 NPAS3Q8IXF0 933 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms