RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 NETO1Q8TDF5 533 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 SLC35F5Q8WV83 523 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 TPSD1Q9BZJ3 242 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 CNGB3Q9NQW8 809 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 FBXO10Q9UK96 956 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 CEP250Q9BV73 2442 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 DMXL1Q9Y485 3027 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 SLC12A8A0AV02 714 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 TRIM24O15164 1050 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 HMBSP08397 361 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 CISD3P0C7P0 127 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 HNRNPLP14866 589 aaKnown RBP eCLIP24.1■■□□□ 1.45
SSBP4-205ENST00000598159 CORO1AP31146 461 aaKnown RBP24.1■■□□□ 1.45
SSBP4-205ENST00000598159 DGKGP49619 791 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 ADIGQ0VDE8 80 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 BSPRYQ5W0U4 402 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 BHLHA9Q7RTU4 235 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 RNF139Q8WU17 664 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 NDRG1Q92597 394 aaKnown RBP24.1■■□□□ 1.45
SSBP4-205ENST00000598159 KAT5Q92993 513 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 ABCC13Q9NSE7 274 aa24.1■■□□□ 1.45
SSBP4-205ENST00000598159 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.1■■□□□ 1.45
SSBP4-205ENST00000598159 NTSR1P30989 418 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 GBP1P32455 592 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 BYSLQ13895 437 aaKnown RBP24.09■■□□□ 1.45
SSBP4-205ENST00000598159 PLA2G2CQ5R387 149 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 SDE2Q6IQ49 451 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 DENND1CQ8IV53 801 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 ARHGEF19Q8IW93 802 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 RBBP8NLQ8NC74 664 aaPredicted RBP24.09■■□□□ 1.45
SSBP4-205ENST00000598159 OLIG1Q8TAK6 271 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 PLD4Q96BZ4 506 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 AGO1Q9UL18 857 aaKnown RBP24.09■■□□□ 1.45
SSBP4-205ENST00000598159 INVSQ9Y283 1065 aa24.09■■□□□ 1.45
SSBP4-205ENST00000598159 ABCA7Q8IZY2 2146 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 PENKP01210 267 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 LCP1P13796 627 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 TRIP4Q15650 581 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 PMF1Q6P1K2 205 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 CPXM2Q8N436 756 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 C12orf50Q8NA57 414 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 MLKLQ8NB16 471 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 IRGQQ8WZA9 623 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 HSFY1Q96LI6 401 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 INTS2Q9H0H0 1204 aaKnown RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 ZDHHC4Q9NPG8 344 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 PLK2Q9NYY3 685 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 BCCIPQ9P287 314 aaKnown RBP eCLIP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 CNTN6Q9UQ52 1028 aa24.08■■□□□ 1.45
SSBP4-205ENST00000598159 HBS1LQ9Y450 684 aaKnown RBP24.08■■□□□ 1.45
SSBP4-205ENST00000598159 YJEFN3A6XGL0 299 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 E7ENQ6 273 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 CYBBP04839 570 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 HARS2P49590 506 aaKnown RBP24.07■■□□□ 1.44
SSBP4-205ENST00000598159 DAOAP59103 153 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 TOGARAM2Q6ZUX3 1019 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 CREBRFQ8IUR6 639 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 FMNL3Q8IVF7 1028 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 BHMTQ93088 406 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 FAM81BQ96LP2 452 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 KREMEN1Q96MU8 473 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 ZSWIM1Q9BR11 485 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 UBE2TQ9NPD8 197 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-205ENST00000598159 VPS45Q9NRW7 570 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 HCN2Q9UL51 889 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 SLC27A6Q9Y2P4 619 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 THADAQ6YHU6 1953 aa24.07■■□□□ 1.44
SSBP4-205ENST00000598159 TCRBV21S2A2A0A5A6 115 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 PRRT4C9JH25 899 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 M0QYV0 167 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 SLC30A4O14863 429 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 ZBTB24O43167 697 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-205ENST00000598159 BRD2P25440 801 aaKnown RBP24.06■■□□□ 1.44
SSBP4-205ENST00000598159 MPLP40238 635 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 ZNF132P52740 706 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 AASDHQ4L235 1098 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-205ENST00000598159 FYB2Q5VWT5 728 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 PMS2CLQ68D20 193 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 ENOSF1Q7L5Y1 443 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 PGBD3Q8N328 593 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 HMGB4Q8WW32 186 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 EDEM1Q92611 657 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 SFMBT1Q9UHJ3 866 aa24.06■■□□□ 1.44
SSBP4-205ENST00000598159 BCLAF3A2AJT9 711 aaKnown RBP24.05■■□□□ 1.44
SSBP4-205ENST00000598159 GFRA2O00451 464 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 GDF9O60383 454 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 GABBR2O75899 941 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 FBXO21O94952 628 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 HOXB2P14652 356 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 P2RY2P41231 377 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 RGS7P49802 495 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 CREB5Q02930 508 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 SF3A2Q15428 464 aaKnown RBP24.05■■□□□ 1.44
SSBP4-205ENST00000598159 CCDC6Q16204 474 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 EGFLAMQ63HQ2 1017 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 FAM217AQ8IXS0 508 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 CHPFQ8IZ52 775 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 SPACA7Q96KW9 195 aa24.05■■□□□ 1.44
SSBP4-205ENST00000598159 CAVIN2O95810 425 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms