RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PLK2Q9NYY3 685 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 FBXO10Q9UK96 956 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 AGO1Q9UL18 857 aaKnown RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIG1-215ENST00000597901 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
LIG1-215ENST00000597901 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.79■□□□□ 0.12
LIG1-215ENST00000597901 FOXD2O60548 495 aaPredicted RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 ALDH1A2O94788 518 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 RHOBTB1O94844 696 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 BRD2P25440 801 aaKnown RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 CORO1AP31146 461 aaKnown RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 ZNF132P52740 706 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 TOGARAM2Q6ZUX3 1019 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 DENND1CQ8IV53 801 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 ZNF513Q8N8E2 541 aaPredicted RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 RNF139Q8WU17 664 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 EDEM1Q92611 657 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 TPSD1Q9BZJ3 242 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 CLSTN2Q9H4D0 955 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 POLMQ9NP87 494 aaPredicted RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 ABCC13Q9NSE7 274 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 OLA1Q9NTK5 396 aaKnown RBP15.78■□□□□ 0.12
LIG1-215ENST00000597901 ZNF292O60281 2723 aa15.78■□□□□ 0.12
LIG1-215ENST00000597901 PRRT4C9JH25 899 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 PIK3R2O00459 728 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 EPN2O95208 641 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 SLC9A1P19634 815 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 DGKGP49619 791 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 ATXN1P54253 815 aaKnown RBP15.77■□□□□ 0.12
LIG1-215ENST00000597901 DAOAP59103 153 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 TRIP4Q15650 581 aaPredicted RBP15.77■□□□□ 0.12
LIG1-215ENST00000597901 FMNL3Q8IVF7 1028 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 OLIG1Q8TAK6 271 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 BHMTQ93088 406 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 HSFY1Q96LI6 401 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 CRACR2AQ9BSW2 395 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.12
LIG1-215ENST00000597901 ATG2BQ96BY7 2078 aa15.77■□□□□ 0.11
LIG1-215ENST00000597901 HELZP42694 1942 aaKnown RBP15.76■□□□□ 0.11
LIG1-215ENST00000597901 M0QYV0 167 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 PENKP01210 267 aaPredicted RBP15.76■□□□□ 0.11
LIG1-215ENST00000597901 ZNF806P0C7X5 589 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 KRT5P13647 590 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 NTSR1P30989 418 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 WASP42768 502 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 ELF2Q15723 593 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 CCDC6Q16204 474 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 FYB2Q5VWT5 728 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 SDE2Q6IQ49 451 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 PRR23CQ6ZRP0 262 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 TRMT11Q7Z4G4 463 aaKnown RBP15.76■□□□□ 0.11
LIG1-215ENST00000597901 CPXM2Q8N436 756 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 IRGQQ8WZA9 623 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 PLD4Q96BZ4 506 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 ACOX2Q99424 681 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 RTKNQ9BST9 563 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 HBS1LQ9Y450 684 aaKnown RBP15.76■□□□□ 0.11
LIG1-215ENST00000597901 PCDHGA5Q9Y5G8 931 aa15.76■□□□□ 0.11
LIG1-215ENST00000597901 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.75■□□□□ 0.11
LIG1-215ENST00000597901 GBP1P32455 592 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 ANP32AP39687 249 aaKnown RBP15.75■□□□□ 0.11
LIG1-215ENST00000597901 GPD2P43304 727 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 HARS2P49590 506 aaKnown RBP15.75■□□□□ 0.11
LIG1-215ENST00000597901 MFAP3P55082 362 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 SF3A2Q15428 464 aaKnown RBP15.75■□□□□ 0.11
LIG1-215ENST00000597901 PLA2G2CQ5R387 149 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 EGFLAMQ63HQ2 1017 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 GJB7Q6PEY0 223 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 GBP6Q6ZN66 633 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 CLEC17AQ6ZS10 378 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 C11orf74Q86VG3 221 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 SCUBE3Q8IX30 993 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 PGBD3Q8N328 593 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 ZNF606Q8WXB4 792 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 RLN3Q8WXF3 142 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 MIS12Q9H081 205 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 SLC27A6Q9Y2P4 619 aa15.75■□□□□ 0.11
LIG1-215ENST00000597901 WDR87Q6ZQQ6 2873 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 A0A1W2PQF6 199 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 TCRBV21S2A2A0A5A6 115 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 GDF9O60383 454 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 FBXO21O94952 628 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 LETM1O95202 739 aaPredicted RBP15.74■□□□□ 0.11
LIG1-215ENST00000597901 CYBBP04839 570 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 BCKDHBP21953 392 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 P2RY2P41231 377 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
LIG1-215ENST00000597901 RPL34P49207 117 aaKnown RBP15.74■□□□□ 0.11
LIG1-215ENST00000597901 APBA1Q02410 837 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 TPD52L1Q16890 204 aaPredicted RBP15.74■□□□□ 0.11
LIG1-215ENST00000597901 DENND1BQ6P3S1 775 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 TRIM65Q6PJ69 517 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 FAM217AQ8IXS0 508 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 FRMD1Q8N878 549 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 NETO1Q8TDF5 533 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 CLEC4CQ8WTT0 213 aa15.74■□□□□ 0.11
LIG1-215ENST00000597901 DDI1Q8WTU0 396 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms