RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 STARD3Q14849 445 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 PLEKHG6Q3KR16 790 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 ZNF394Q53GI3 561 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 SYCP2LQ5T4T6 812 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 PPP1R26Q5T8A7 1209 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 TMEM174Q8WUU8 243 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 GATA6Q92908 595 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 SNX21Q969T3 373 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 CCDC47Q96A33 483 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 ZNF419Q96HQ0 510 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 PNPLA8Q9NP80 782 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 CD93Q9NPY3 652 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 SUSD2Q9UGT4 822 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 ZNF510Q9Y2H8 683 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 NEUROG3Q9Y4Z2 214 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
CHMP2A-202ENST00000596708 ADAMTS20P59510 1910 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 MEI4A8MW99 385 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 H0Y626 953 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 STC2O76061 302 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 TRIM16O95361 564 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 TRIM49P0CI25 452 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 TRIM49CP0CI26 452 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 PFKFB1P16118 471 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 NR2F2P24468 414 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 CHKAP35790 457 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 COG7P83436 770 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 INCA1Q0VD86 236 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 EFEMP1Q12805 493 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 HNRNPDQ14103 355 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 WDR45BQ5MNZ6 344 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 Q6ZNB5 142 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 TAS1R2Q8TE23 839 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 FOXJ1Q92949 421 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 MRGPRX1Q96LB2 322 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 HEXIM2Q96MH2 286 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 CDK5RAP1Q96SZ6 601 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 DUSP16Q9BY84 665 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 FAM124BQ9H5Z6 455 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 PRDM16Q9HAZ2 1276 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 APOBEC3GQ9HC16 384 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 CD248Q9HCU0 757 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 FBXO10Q9UK96 956 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 TRAF3IP3Q9Y228 551 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 STON1Q9Y6Q2 735 aa11.1□□□□□ -0.63
CHMP2A-202ENST00000596708 SRRM3A6NNA2 597 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 MAPK13O15264 365 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 SH3BP5O60239 455 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 SYNCRIPO60506 623 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CILPO75339 1184 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CYBBP04839 570 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 MYL1P05976 194 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CD59P13987 128 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CD6P30203 668 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CORO1AP31146 461 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 FAM193AP78312 1265 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 PPP3CAQ08209 521 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 ADAM9Q13443 819 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 PKP1Q13835 747 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 FUT11Q495W5 492 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 RSRC2Q7L4I2 434 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CHCHD4Q8N4Q1 142 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 ZNF276Q8N554 614 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 TOE1Q96GM8 510 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 NIF3L1Q9GZT8 377 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 MIR1-1HGQ9H1L0 117 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 CLIC5Q9NZA1 410 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 USP3Q9Y6I4 520 aa11.09□□□□□ -0.63
CHMP2A-202ENST00000596708 SLC12A8A0AV02 714 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 PENKP01210 267 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 KLKB1P03952 638 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 ACADMP11310 421 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 CMA1P23946 247 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 IL12RB1P42701 662 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 SYKP43405 635 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 MFAP3P55082 362 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 ARID5AQ03989 594 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 SLC14A1Q13336 389 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 TRIP6Q15654 476 aaKnown RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 GEN1Q17RS7 908 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms