RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SPOCD1Q6ZMY3 1216 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ADGRD2Q7Z7M1 963 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 TMEM150AQ86TG1 271 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 FAM131BQ86XD5 332 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SLC13A5Q86YT5 568 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 CCDC185Q8N715 623 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 TIFAQ96CG3 184 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ACSF2Q96CM8 615 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 HERPUD2Q9BSE4 406 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 FAM204AQ9H8W3 233 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ZNF334Q9HCZ1 680 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 KLHL11Q9NVR0 708 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 DDIT4Q9NX09 232 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 UXTQ9UBK9 157 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 C2orf16Q68DN1 1984 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 NUP205Q92621 2012 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 hCG_1818297A0A087WSY0 165 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 LRRD1A4D1F6 860 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 PAPLNO95428 1278 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 FGGP02679 453 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 LRG1P02750 347 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 F11P03951 625 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 POU2F2P09086 479 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 EPCAMP16422 314 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 HOXA9P31269 272 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 GBP1P32455 592 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 CDKN2BP42772 138 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 PAFAH1B1P43034 410 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 PPP3CCP48454 512 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 AIF1P55008 147 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 NME3Q13232 169 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 SIX1Q15475 284 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 CLUL1Q15846 466 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 DPYSL2Q16555 572 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 ZC3H12AQ5D1E8 599 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 CCDC181Q5TID7 509 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 TMC8Q8IU68 726 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 MNS1Q8NEH6 495 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 RNF139Q8WU17 664 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 SLC39A13Q96H72 371 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 RPGRIP1Q96KN7 1286 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 SERPINB11Q96P15 392 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 OSBPL8Q9BZF1 889 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 PCDH18Q9HCL0 1135 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 ARHGEF38Q9NXL2 777 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 TRPM5Q9NZQ8 1165 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 BRWD1Q9NSI6 2320 aa15.33■□□□□ 0.04
SHKBP1-211ENST00000595945 SYNJ2BP-COX16A0A087WUM0 186 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 L1CAMP32004 1257 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 ADRA1BP35368 520 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 TUBP50607 506 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 NNTQ13423 1086 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 PPP2R5DQ14738 602 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 PDK2Q15119 407 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 TAF12Q16514 161 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 DUSP6Q16828 381 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 LONRF2Q1L5Z9 754 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 BRMS1LQ5PSV4 323 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 PPM1LQ5SGD2 360 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 KLHDC10Q6PID8 442 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 SPATA4Q8NEY3 305 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 TSC1Q92574 1164 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 HSPH1Q92598 858 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 FAF2Q96CS3 445 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 KCTD15Q96SI1 283 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 NAP1L3Q99457 506 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 CCSER2Q9H7U1 834 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 ANLNQ9NQW6 1124 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 COX16Q9P0S2 106 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 SFMBT1Q9UHJ3 866 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 NUDT5Q9UKK9 219 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 AP4E1Q9UPM8 1137 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 EFR3BQ9Y2G0 817 aa15.32■□□□□ 0.04
SHKBP1-211ENST00000595945 TCRBV7S2A1N4TA0A589 114 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 PER2O15055 1255 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 MSI1O43347 362 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TLR5O60602 858 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TBX18O95935 607 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 IGLV3-27P01718 113 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 CD48P09326 243 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms