RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DDIT3P35638 169 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 COPAP53621 1224 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 KCNC4Q03721 635 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PKP1Q13835 747 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 DYMQ7RTS9 669 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 KRI1Q8N9T8 703 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PDZD8Q8NEN9 1154 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 OR6B3Q8NGW1 331 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 BAP1Q92560 729 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PRCCQ92733 491 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 CBWD1Q9BRT8 395 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 STRA6Q9BX79 667 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 R3HCC1Q9Y3T6 440 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PTPN13Q12923 2485 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 COL6A6A6NMZ7 2263 aa14.52□□□□□ -0.08
SHKBP1-208ENST00000595726 RTN3O95197 1032 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 CST3P01034 146 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 IGLV3-19P01714 112 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 ACADMP11310 421 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 ACSL1P33121 698 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 TXLNAP40222 546 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 CCT8P50990 548 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 LY6DQ14210 128 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 NUMA1Q14980 2115 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 RTP5Q14D33 572 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 STK38Q15208 465 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 GEN1Q17RS7 908 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 SNX30Q5VWJ9 437 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 SPACA3Q8IXA5 215 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 SNIP1Q8TAD8 396 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 OVCA2Q8WZ82 227 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 FGF11Q92914 225 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 IGSF8Q969P0 613 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 DUSP9Q99956 384 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 KLF16Q9BXK1 252 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 ELOVL4Q9GZR5 314 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 INTS13Q9NVM9 706 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 MARK1Q9P0L2 795 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 CCDC39Q9UFE4 941 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 TMEM131Q92545 1883 aa14.52□□□□□ -0.09
SHKBP1-208ENST00000595726 A0A087X0B3 334 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ENC1O14682 589 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 SPTLC2O15270 562 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 BRINP1O60477 761 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 SYNCRIPO60506 623 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 TLR5O60602 858 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 YEATS4O95619 227 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ZDHHC11BP0C7U3 371 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 PRKCHP24723 683 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 HNF1BP35680 557 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 CASP5P51878 434 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 SLC5A3P53794 718 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 TEAD4Q15561 434 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 HES3Q5TGS1 186 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ENGASEQ8NFI3 743 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 SORCS1Q8WY21 1168 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 NAF1Q96HR8 494 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ANKRD36BP1Q96IX9 119 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 HNRNPABQ99729 332 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 MRPL44Q9H9J2 332 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 THAP10Q9P2Z0 257 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 TFIP11Q9UBB9 837 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 FBXO10Q9UK96 956 aa14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 UBR5O95071 2799 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-208ENST00000595726 CAPN8A6NHC0 703 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 ERVH48-1M5A8F1 160 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 PPP6R2O75170 966 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 LDOC1O95751 146 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 LDHAP00338 332 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 TNNC2P02585 160 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 ACO1P21399 889 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 CTSKP43235 329 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 TUBP50607 506 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 KCNH2Q12809 1159 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 ENPP2Q13822 863 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 FOXD4L6Q3SYB3 417 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 L1TD1Q5T7N2 865 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 RRAGBQ5VZM2 374 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 FOXD4L3Q6VB84 417 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 PAQR9Q6ZVX9 377 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 BIRC7Q96CA5 298 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 TMEM176AQ96HP8 235 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 CNDP2Q96KP4 475 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 FGFBP2Q9BYJ0 223 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 NRSN2Q9GZP1 204 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 CPNE5Q9HCH3 593 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 IL37Q9NZH6 218 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 NUDT5Q9UKK9 219 aa14.5□□□□□ -0.09
SHKBP1-208ENST00000595726 FLNCQ14315 2725 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 A8MXQ7 604 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 B8ZZF3 427 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 MDM4O15151 490 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 RFPL3O75679 317 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms