RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 OTUD1Q5VV17 481 aaPredicted RBP23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 CELF5Q8N6W0 485 aaKnown RBP23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 ADAM32Q8TC27 787 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 RXFP2Q8WXD0 754 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 CTNNBL1Q8WYA6 563 aaPredicted RBP23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 PLA2G2FQ9BZM2 168 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 INTUQ9ULD6 942 aa23.53■■□□□ 1.36
SNRNP70-204ENST00000595231 TMEM191CA6NGB0 347 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 C19orf67A6NJJ6 358 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 MSI1O43347 362 aaKnown RBP23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 TRUB2O95900 331 aaKnown RBP23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 TCF3P15923 654 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 CCDC173Q0VFZ6 552 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 TAC4Q86UU9 113 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.52■■□□□ 1.362e-6■□□□□ 8.6
SNRNP70-204ENST00000595231 SH3RF2Q8TEC5 729 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 WBP2Q969T9 261 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 ELSPBP1Q96BH3 223 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 CFAP57Q96MR6 1250 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 MRPL47Q9HD33 250 aaKnown RBP23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 OBP2AQ9NY56 170 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 NUMBLQ9Y6R0 609 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 SCINQ9Y6U3 715 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 MYO10Q9HD67 2058 aa23.52■■□□□ 1.36
SNRNP70-204ENST00000595231 LEFTY2O00292 366 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 ARHGAP6O43182 974 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 PDGFRAP16234 1089 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 COG7P83436 770 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 OGDHQ02218 1023 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 SLC25A52Q3SY17 297 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 CCDC14Q49A88 953 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 DCUN1D2Q6PH85 259 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 MTSS1LQ765P7 747 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 BNIPLQ7Z465 357 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 ACRBPQ8NEB7 543 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 RSAD2Q8WXG1 361 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 TRIM7Q9C029 511 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 KIF9Q9HAQ2 790 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 RRN3Q9NYV6 651 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 TFR2Q9UP52 801 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 A0A0C4DFX4 3053 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 SLC12A8A0AV02 714 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 HEPACAM2A8MVW5 462 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 GREM1O60565 184 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 ECI2O75521 394 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 ZNF77Q15935 545 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 VITQ6UXI7 678 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 E2F7Q96AV8 911 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 TBCBQ99426 244 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 KXD1Q9BQD3 176 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 KCNK12Q9HB15 430 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 STAP1Q9ULZ2 295 aa23.51■■□□□ 1.35
SNRNP70-204ENST00000595231 M0QYT0 321 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 IRAK2O43187 625 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 STC2O76061 302 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 IGLV3-27P01718 113 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 PTMAP06454 111 aaKnown RBP23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 PTPN9P43378 593 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 USP4Q13107 963 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 TRIP4Q15650 581 aaPredicted RBP23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 PGAP3Q96FM1 320 aaPredicted RBP23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 SLC39A13Q96H72 371 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 SERPINB11Q96P15 392 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 DESI2Q9BSY9 194 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 NUP85Q9BW27 656 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 CFAP97Q9P2B7 532 aa23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 HBS1LQ9Y450 684 aaKnown RBP23.5■■□□□ 1.35
SNRNP70-204ENST00000595231 RCCD1A6NED2 376 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 DPYSL4O14531 572 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 ENDOD1O94919 500 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 HMBSP08397 361 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 GPD1P21695 349 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 ZNF143P52747 638 aaPredicted RBP23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 ZNF252P-AS1Q0IIN9 211 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 NNTQ13423 1086 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 C15orf59Q2T9L4 293 aaPredicted RBP23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 SH3PXD2AQ5TCZ1 1133 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 MFSD6LQ8IWD5 586 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 CENPIQ92674 756 aaPredicted RBP23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 KCNF1Q9H3M0 494 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 DDIT4Q9NX09 232 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 TLR6Q9Y2C9 796 aa23.49■■□□□ 1.35
SNRNP70-204ENST00000595231 IPO7O95373 1038 aaKnown RBP23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 KLKB1P03952 638 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 IRF1P10914 325 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 SDC4P31431 198 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 SULT1E1P49888 294 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 FCHO2Q0JRZ9 810 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 RAB6CQ53S08 254 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 DDX42Q86XP3 938 aaKnown RBP eCLIP23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 TTC16Q8NEE8 873 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 BPIFB1Q8TDL5 484 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 NXPE3Q969Y0 559 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 ZNF830Q96NB3 372 aaPredicted RBP23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 RAB6CQ9H0N0 254 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 OSGEPQ9NPF4 335 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 IGSF9Q9P2J2 1179 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 ASGR2P07307 311 aa23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 KPNA1P52294 538 aaPredicted RBP23.48■■□□□ 1.35
SNRNP70-204ENST00000595231 TBX4P57082 545 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms