RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 STIM2Q9P246 746 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 YIPF1Q9Y548 306 aa21.63■■□□□ 1.05
PNKP-203ENST00000593946 RANBP2P49792 3224 aaKnown RBP21.63■■□□□ 1.05
PNKP-203ENST00000593946 CCDC85CA6NKD9 419 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 TUBBP07437 444 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 PSEN1P49768 467 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 SCAPQ12770 1279 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 MMRN1Q13201 1228 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 MSANTD2Q6P1R3 559 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 WDR93Q6P2C0 686 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 MAATS1Q7Z4T9 603 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 TCEAL8Q8IYN2 117 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 C1orf54Q8WWF1 131 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 ZNF670Q9BS34 389 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 DHX35Q9H5Z1 703 aaKnown RBP21.62■■□□□ 1.05
PNKP-203ENST00000593946 CLIC5Q9NZA1 410 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 FBXW11Q9UKB1 542 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 IRAK3Q9Y616 596 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 ANAPC1Q9H1A4 1944 aa21.62■■□□□ 1.05
PNKP-203ENST00000593946 C5orf67F2Z3F1 127 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 IRAK2O43187 625 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 ARHGEF15O94989 841 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 ZDHHC11BP0C7U3 371 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 MYOGP15173 224 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 COILP38432 576 aaPredicted RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 DHX34Q14147 1143 aaKnown RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 SHHQ15465 462 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 CCNG2Q16589 344 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 FAM109BQ6ICB4 259 aaPredicted RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 CCDC137Q6PK04 289 aaKnown RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 TMC7Q7Z402 723 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 ATG4AQ8WYN0 398 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 FAF2Q96CS3 445 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 RUNDC3BQ96NL0 473 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 KCTD15Q96SI1 283 aaPredicted RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 C17orf80Q9BSJ5 609 aa21.61■■□□□ 1.05
PNKP-203ENST00000593946 ALG13Q9NP73 1137 aaKnown RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 TLR8Q9NR97 1041 aaKnown RBP21.61■■□□□ 1.05
PNKP-203ENST00000593946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 CST8O60676 142 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 HEXIM1O94992 359 aaKnown RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 CXCL14O95715 111 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 H2AFXP16104 143 aaPredicted RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 GBP1P32455 592 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 ADRA1BP35368 520 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 VSNL1P62760 191 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 PPP6R3Q5H9R7 873 aaPredicted RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 SND1Q7KZF4 910 aaKnown RBP eCLIP21.6■■□□□ 1.05
PNKP-203ENST00000593946 RNF139Q8WU17 664 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 CASP10Q92851 521 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 RNF157Q96PX1 679 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 MAGEB5Q9BZ81 275 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 OBSL1O75147 1896 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 GRXCR1A8MXD5 290 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 I6L893 689 aaPredicted RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 TTI1O43156 1089 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 ALDH1A3P47895 512 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 ERVFC1P60507 584 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 DR1Q01658 176 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 SPRED2Q7Z698 418 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 RFX6Q8HWS3 928 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 SPPL3Q8TCT6 385 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 TCF25Q9BQ70 676 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 UBE2OQ9C0C9 1292 aaKnown RBP21.6■■□□□ 1.05
PNKP-203ENST00000593946 ANLNQ9NQW6 1124 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 TMPRSS4Q9NRS4 437 aa21.6■■□□□ 1.05
PNKP-203ENST00000593946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.6■■□□□ 1.05
PNKP-203ENST00000593946 PRRG1O14668 218 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 CSH1P0DML2 217 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 CSH2P0DML3 217 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 HMGA1P17096 107 aaKnown RBP21.59■■□□□ 1.05
PNKP-203ENST00000593946 ELF1P32519 619 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 CA8P35219 290 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 PTGIRP43119 386 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 UBE3AQ05086 875 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 TFDP2Q14188 446 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 ANKRD20A8PQ5CZ79 823 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 EFHC2Q5JST6 749 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 PYROXD2Q8N2H3 581 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 SLCO2A1Q92959 643 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 MYRFLQ96LU7 910 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 PLEKHA4Q9H4M7 779 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 WDCPQ9H6R7 721 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 RCOR3Q9P2K3 495 aaPredicted RBP21.59■■□□□ 1.05
PNKP-203ENST00000593946 MAGED2Q9UNF1 606 aaPredicted RBP21.59■■□□□ 1.05
PNKP-203ENST00000593946 INSL5Q9Y5Q6 135 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 MYO7AQ13402 2215 aa21.59■■□□□ 1.05
PNKP-203ENST00000593946 DENND4CQ5VZ89 1909 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 BHMG1C9JSJ3 638 aaPredicted RBP21.58■■□□□ 1.05
PNKP-203ENST00000593946 ZMYND10O75800 440 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 ADH1AP07327 375 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 DNAJB1P25685 340 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 KCNJ1P48048 391 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 DYNLT1P63172 113 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 SNX1Q13596 522 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 ARL13BQ3SXY8 428 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 DRICH1Q6PGQ1 229 aaPredicted RBP21.58■■□□□ 1.05
PNKP-203ENST00000593946 FBXO38Q6PIJ6 1188 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 CCDC105Q8IYK2 499 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 PCDH19Q8TAB3 1148 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms