RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SLC8A2Q9UPR5 921 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 ZNF510Q9Y2H8 683 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 KIAA1549LQ6ZVL6 1849 aa19.33■□□□□ 0.69
SHKBP1-202ENST00000593764 NEDD8-MDP1E9PL57 170 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 CACNG3O60359 315 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 FBXO21O94952 628 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 FYNP06241 537 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 PNMA6AP0CW24 399 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 TYRP14679 529 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 CLCN1P35523 988 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 TNFRSF4P43489 277 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 KIR2DL1P43626 348 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 PXNP49023 591 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 KDSRQ06136 332 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 DMC1Q14565 340 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 EMC10Q5UCC4 262 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 KLHDC7AQ5VTJ3 777 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 MSANTD2Q6P1R3 559 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 TMEM110Q86TL2 294 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 WDR5BQ86VZ2 330 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 DENND1CQ8IV53 801 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 WDTC1Q8N5D0 677 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 CCDC26Q8TAB7 109 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 RNF139Q8WU17 664 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 PLD4Q96BZ4 506 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 MIS12Q9H081 205 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 TAB2Q9NYJ8 693 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 DEC1Q9P2X7 70 aa19.33■□□□□ 0.68
SHKBP1-202ENST00000593764 CCDC163A0A0D9SF12 145 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 PES1O00541 588 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 LTFP02788 710 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 ACADSBP45954 432 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 MRPS21P82921 87 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 SRSF5Q13243 272 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 KRT31Q15323 416 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 STX1AQ16623 288 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 FAM71AQ8IYT1 594 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 CAMKK1Q8N5S9 505 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 ACDQ96AP0 544 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 HHIPQ96QV1 700 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 NAA15Q9BXJ9 866 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 ST7Q9NRC1 585 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 FBXO10Q9UK96 956 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 HCN2Q9UL51 889 aa19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 HBS1LQ9Y450 684 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-202ENST00000593764 TBC1D3BA6NDS4 549 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 PAPSS1O43252 624 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 MSI1O43347 362 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 PENKP01210 267 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 CISD3P0C7P0 127 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 CHKAP35790 457 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 PTK2Q05397 1052 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 DRAP1Q14919 205 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 FYB2Q5VWT5 728 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 SLC47A2Q86VL8 602 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 FAM217AQ8IXS0 508 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 CCDC33Q8N5R6 958 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 TERB1Q8NA31 727 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 IL17RCQ8NAC3 791 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 BHMTQ93088 406 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 VPS16Q9H269 839 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 DNAJC17Q9NVM6 304 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 PLK2Q9NYY3 685 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 MMP17Q9ULZ9 603 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 PCDHGC3Q9UN70 934 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 SMG5Q9UPR3 1016 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 FHOD1Q9Y613 1164 aa19.31■□□□□ 0.68
SHKBP1-202ENST00000593764 E5RJQ4 531 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 UCHL3P15374 230 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 CNR2P34972 360 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 TIE1P35590 1138 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 NCAPHQ15003 741 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 PREPLQ4J6C6 727 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 TOGARAM2Q6ZUX3 1019 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 CPXM2Q8N436 756 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 DCLK2Q8N568 766 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 ALLCQ8N6M5 410 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 RUBCNQ92622 972 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 XPO6Q96QU8 1125 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 LSM14BQ9BX40 385 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 LHX5Q9H2C1 402 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 HSD3B7Q9H2F3 369 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 ZDHHC4Q9NPG8 344 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 TJP2Q9UDY2 1190 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 STOML2Q9UJZ1 356 aa19.3■□□□□ 0.68
SHKBP1-202ENST00000593764 SDK1Q7Z5N4 2213 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 DMXL1Q9Y485 3027 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 GFRA2O00451 464 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 ADAM23O75077 832 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 IGLV3-27P01718 113 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 HNRNPLP14866 589 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 HARS2P49590 506 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 MYL5Q02045 173 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 TYRO3Q06418 890 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 PDCLQ13371 301 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 HSF5Q4G112 596 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 GRAMD4Q6IC98 578 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 TMEM92Q6UXU6 159 aa19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 TXNDC5Q8NBS9 432 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-202ENST00000593764 PLCB1Q9NQ66 1216 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms