RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HYAL3O43820 417 aaPredicted RBP11.22□□□□□ -0.61
USE1-203ENST00000593597 GJB3O75712 270 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 CFIP05156 583 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 P4HA1P13674 534 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 CD59P13987 128 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 NR2F2P24468 414 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 DGKGP49619 791 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 LMAN2Q12907 356 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 ENPP2Q13822 863 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 ZNF394Q53GI3 561 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 TRMT11Q7Z4G4 463 aaKnown RBP11.22□□□□□ -0.61
USE1-203ENST00000593597 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 SMYD4Q8IYR2 804 aaPredicted RBP11.22□□□□□ -0.61
USE1-203ENST00000593597 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 KDF1Q8NAX2 398 aaPredicted RBP11.22□□□□□ -0.61
USE1-203ENST00000593597 SLC4A11Q8NBS3 891 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 MRGPRX1Q96LB2 322 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 HSPA12BQ96MM6 686 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 NT5C1AQ9BXI3 368 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
USE1-203ENST00000593597 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 CYP3A43Q9HB55 503 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
USE1-203ENST00000593597 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 UPK3BL1B0FP48 263 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 KCNJ18B7U540 433 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 UPK3BL2E5RIL1 263 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 AP5Z1O43299 807 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 SERPINF2P08697 491 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 CORO1AP31146 461 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 HOXD12P35452 270 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 IL12RB1P42701 662 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 RAD23BP54727 409 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 MFAP3P55082 362 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 DUOXA1Q1HG43 343 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 FUT11Q495W5 492 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 RAB41Q5JT25 222 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 TMEM215Q68D42 235 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 HSCBQ8IWL3 235 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 TRIML1Q8N9V2 468 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 PIWIL1Q96J94 861 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 CAMK1GQ96NX5 476 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 GTPBP2Q9BX10 602 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 DUSP16Q9BY84 665 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 MKRN2Q9H000 416 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 RASAL2Q9UJF2 1139 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 NAGPAQ9UK23 515 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 CFAP45Q9UL16 551 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 AGO1Q9UL18 857 aaKnown RBP11.21□□□□□ -0.61
USE1-203ENST00000593597 SLC6A14Q9UN76 642 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 FRMD4BQ9Y2L6 1034 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 SLC27A6Q9Y2P4 619 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 SLCO1B1Q9Y6L6 691 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 STON1Q9Y6Q2 735 aa11.21□□□□□ -0.61
USE1-203ENST00000593597 KNL1Q8NG31 2342 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 GFRA2O00451 464 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CAPNS1P04632 268 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 HMBSP08397 361 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 PRKCHP24723 683 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 MAOBP27338 520 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 SYKP43405 635 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 PLA2G4AP47712 749 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 COPAP53621 1224 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 BNC1Q01954 994 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 EFEMP1Q12805 493 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CBWD6Q4V339 395 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CBWD3Q5JTY5 395 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CBWD5Q5RIA9 395 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 SLC36A4Q6YBV0 504 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 KRBA2Q6ZNG9 492 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 FAM217AQ8IXS0 508 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 GUF1Q8N442 669 aaKnown RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 ZNF276Q8N554 614 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 SORCS1Q8WY21 1168 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 TATDN2Q93075 761 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 ZNF419Q96HQ0 510 aaPredicted RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 TMEM8AQ9HCN3 771 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CISHQ9NSE2 258 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 USP36Q9P275 1121 aaKnown RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 WDR35Q9P2L0 1181 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 LSM7Q9UK45 103 aaKnown RBP11.2□□□□□ -0.62
USE1-203ENST00000593597 CACNA1GO43497 2377 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 IGSF10Q6WRI0 2623 aa11.2□□□□□ -0.62
USE1-203ENST00000593597 ARHGAP33O14559 1287 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 GABBR2O75899 941 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 MYL1P05976 194 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 ENPEPQ07075 957 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms