RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 IRGQQ8WZA9 623 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 EDEM1Q92611 657 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 GOLGA1Q92805 767 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 BHMTQ93088 406 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 PLD4Q96BZ4 506 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 ANTXRLA6NF34 631 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 PIK3R2O00459 728 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 LRP3O75074 770 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 ALDH1A2O94788 518 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 FBXO21O94952 628 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 LETM1O95202 739 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 HARS2P49590 506 aaKnown RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 MAN2A1Q16706 1144 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 CT47A1Q5JQC4 288 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 EOGTQ5NDL2 527 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 FAM160A2Q8N612 972 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 ZNF513Q8N8E2 541 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 AGO1Q9UL18 857 aaKnown RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 USP18Q9UMW8 372 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 HBS1LQ9Y450 684 aaKnown RBP15.97■□□□□ 0.15
TRIM28-203ENST00000593582 ATG2BQ96BY7 2078 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 DNAH14Q0VDD8 3507 aa15.97■□□□□ 0.15
TRIM28-203ENST00000593582 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 SGK1O00141 431 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 TRIM24O15164 1050 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 CYBBP04839 570 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
TRIM28-203ENST00000593582 PON1P27169 355 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 GNA15P30679 374 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 USP8P40818 1118 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 ID4P47928 161 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 DGKGP49619 791 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 TRIP4Q15650 581 aaPredicted RBP15.96■□□□□ 0.15
TRIM28-203ENST00000593582 MEA1Q16626 185 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 ARHGAP44Q17R89 818 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 ANO7Q6IWH7 933 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 GJB7Q6PEY0 223 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 TUBGCP2Q9BSJ2 902 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
TRIM28-203ENST00000593582 ST7Q9NRC1 585 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 PLK2Q9NYY3 685 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 STARD13Q9Y3M8 1113 aa15.96■□□□□ 0.15
TRIM28-203ENST00000593582 MYOFQ9NZM1 2061 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 SART1O43290 800 aaKnown RBP15.95■□□□□ 0.14
TRIM28-203ENST00000593582 THAP12O43422 761 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 GABBR2O75899 941 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 PENKP01210 267 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-203ENST00000593582 LTFP02788 710 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 CHRM1P11229 460 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-203ENST00000593582 GPD2P43304 727 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 ACADSBP45954 432 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 APBA1Q02410 837 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 SPEM2Q0P670 501 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 VWA3BQ502W6 1294 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 USP39Q53GS9 565 aaKnown RBP15.95■□□□□ 0.14
TRIM28-203ENST00000593582 HSP90AA4PQ58FG1 418 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 SMYD5Q6GMV2 418 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 TMEM92Q6UXU6 159 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 KBTBD6Q86V97 674 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 CPXM2Q8N436 756 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 ZNF606Q8WXB4 792 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 LOXL4Q96JB6 756 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 MIS12Q9H081 205 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 NDST4Q9H3R1 872 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 ZDHHC4Q9NPG8 344 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
TRIM28-203ENST00000593582 PES1O00541 588 aaKnown RBP15.94■□□□□ 0.14
TRIM28-203ENST00000593582 ADAM23O75077 832 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 TGM1P22735 817 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 LMNB2Q03252 620 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 ELF2Q15723 593 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 FYB2Q5VWT5 728 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 SDE2Q6IQ49 451 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 MSANTD2Q6P1R3 559 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 DENND1BQ6P3S1 775 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 TOGARAM2Q6ZUX3 1019 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 RASSF3Q86WH2 238 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 SCUBE3Q8IX30 993 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 MDGA1Q8NFP4 955 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 CLEC4CQ8WTT0 213 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 DDI1Q8WTU0 396 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 STK32AQ8WU08 396 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 SHC3Q92529 594 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 ZC3H10Q96K80 434 aaKnown RBP15.94■□□□□ 0.14
TRIM28-203ENST00000593582 TRIM62Q9BVG3 475 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 TPSD1Q9BZJ3 242 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 PARD6AQ9NPB6 346 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 BCCIPQ9P287 314 aaKnown RBP eCLIP15.94■□□□□ 0.14
TRIM28-203ENST00000593582 FBXO10Q9UK96 956 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 SPTBN4Q9H254 2564 aa15.94■□□□□ 0.14
TRIM28-203ENST00000593582 BECN2A8MW95 431 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 PRR5-ARHGAP8B1AHC4 643 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 KCNJ18B7U540 433 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 PRRT4C9JH25 899 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 MSI1O43347 362 aaKnown RBP15.93■□□□□ 0.14
TRIM28-203ENST00000593582 LATS1O95835 1130 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 CISD3P0C7P0 127 aa15.93■□□□□ 0.14
TRIM28-203ENST00000593582 NCAM1P13591 858 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms