RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MAPK13O15264 365 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
LIG1-205ENST00000593425 OPHN1O60890 802 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
LIG1-205ENST00000593425 NR2F2P24468 414 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 FYB2Q5VWT5 728 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 KIAA1324Q6UXG2 1013 aaKnown RBP17.2■□□□□ 0.34
LIG1-205ENST00000593425 RABEPKQ7Z6M1 372 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 ZNF419Q96HQ0 510 aaPredicted RBP17.2■□□□□ 0.34
LIG1-205ENST00000593425 IMPG2Q9BZV3 1241 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 NEUROG3Q9Y4Z2 214 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 USP3Q9Y6I4 520 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 STON1Q9Y6Q2 735 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 GFRA2O00451 464 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 KIF20AO95235 890 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 CD59P13987 128 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 NFIL3Q16649 462 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 GEN1Q17RS7 908 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 RGL4Q8IZJ4 473 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 ZNF276Q8N554 614 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 DUSP16Q9BY84 665 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 RASAL2Q9UJF2 1139 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 MAPK8IP1Q9UQF2 711 aa17.19■□□□□ 0.34
LIG1-205ENST00000593425 PCNX2A6NKB5 2137 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 NDUFS2O75306 463 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 GJB3O75712 270 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 PENKP01210 267 aaPredicted RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 HMBSP08397 361 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 CMA1P23946 247 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 MAOBP27338 520 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 IL12RB1P42701 662 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 PSEN1P49768 467 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 MFAP3P55082 362 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 EFEMP1Q12805 493 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 PLEKHG6Q3KR16 790 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 FUT11Q495W5 492 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 FAM186BQ8IYM0 893 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 SPRYD3Q8NCJ5 442 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 ZCCHC14Q8WYQ9 949 aaKnown RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 MKRN2Q9H000 416 aaKnown RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 DNAAF2Q9NVR5 837 aaKnown RBP17.18■□□□□ 0.34
LIG1-205ENST00000593425 CLIC5Q9NZA1 410 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 SLC27A6Q9Y2P4 619 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 MSRB2Q9Y3D2 182 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 CEP295Q9C0D2 2601 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 WDFY3Q8IZQ1 3526 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 CKAP5Q14008 2032 aa17.18■□□□□ 0.34
LIG1-205ENST00000593425 SRRM3A6NNA2 597 aaPredicted RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 RHOBTB3O94955 611 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 MYL1P05976 194 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 SYPP08247 313 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 RALAP11233 206 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 CD6P30203 668 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 CORO1AP31146 461 aaKnown RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 TADA2BQ86TJ2 420 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 SEMA4DQ92854 862 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 TMEM8AQ9HCN3 771 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 USP36Q9P275 1121 aaKnown RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 THAP10Q9P2Z0 257 aaPredicted RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 AGO1Q9UL18 857 aaKnown RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 CLEC4EQ9ULY5 219 aa17.17■□□□□ 0.34
LIG1-205ENST00000593425 MUC22E2RYF6 1773 aaPredicted RBP17.17■□□□□ 0.34
LIG1-205ENST00000593425 KCNJ18B7U540 433 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 SH3BP5O60239 455 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 KRT13P13646 458 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 COG7P83436 770 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 DPYDQ12882 1025 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 ENPP2Q13822 863 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 STARD3Q14849 445 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 CHCHD4Q8N4Q1 142 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 TOE1Q96GM8 510 aaKnown RBP17.16■□□□□ 0.34
LIG1-205ENST00000593425 HEXIM2Q96MH2 286 aaKnown RBP17.16■□□□□ 0.34
LIG1-205ENST00000593425 ARID3AQ99856 593 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 FAM124BQ9H5Z6 455 aaPredicted RBP17.16■□□□□ 0.34
LIG1-205ENST00000593425 PRDM16Q9HAZ2 1276 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 WSB2Q9NYS7 404 aaPredicted RBP17.16■□□□□ 0.34
LIG1-205ENST00000593425 SUSD2Q9UGT4 822 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 ZNF510Q9Y2H8 683 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 AKAP13Q12802 2813 aa17.16■□□□□ 0.34
LIG1-205ENST00000593425 CHD6Q8TD26 2715 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 CHKAP35790 457 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 SYKP43405 635 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 NDUFA8P51970 172 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 ENPEPQ07075 957 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 GRIK2Q13002 908 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 RAB41Q5JT25 222 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 SYCP2LQ5T4T6 812 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 METTL3Q86U44 580 aaKnown RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 PIGZQ86VD9 579 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms