RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 VWA8A3KMH1 1905 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 SYN3O14994 580 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 HOXA2O43364 376 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 OAZ2O95190 189 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 GOT1P17174 413 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 ACTN2P35609 894 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 NR2C2P49116 596 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 SKOR1P84550 965 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 SLC39A12Q504Y0 691 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 PM20D1Q6GTS8 502 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 CTU1Q7Z7A3 348 aaKnown RBP12.39□□□□□ -0.43
NPC1-214ENST00000593280 PYROXD2Q8N2H3 581 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
NPC1-214ENST00000593280 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 ZCWPW1Q9H0M4 648 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 LRRC4CQ9HCJ2 640 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 CWC15Q9P013 229 aaKnown RBP12.39□□□□□ -0.43
NPC1-214ENST00000593280 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
NPC1-214ENST00000593280 USP3Q9Y6I4 520 aa12.39□□□□□ -0.43
NPC1-214ENST00000593280 ZNF638Q14966 1978 aaKnown RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 SMAPO00193 183 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 KCNN4O15554 427 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 OR4Q2P0C623 313 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 CAPN2P17655 700 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 GRIK1P39086 918 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 MAGEA4P43358 317 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 GATMP50440 423 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 XRCC4Q13426 336 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 KYNUQ16719 465 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 CENPUQ71F23 418 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 EPS8L3Q8TE67 593 aaKnown RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 RNF139Q8WU17 664 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 CPT1BQ92523 772 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 EDEM1Q92611 657 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 RTP4Q96DX8 246 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 PGM2Q96G03 612 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 SCLYQ96I15 445 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 TTC25Q96NG3 672 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 MRPL9Q9BYD2 267 aaKnown RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ROPN1BQ9BZX4 212 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 STMN4Q9H169 189 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 ROPN1Q9HAT0 212 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 DDIT4Q9NX09 232 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 PAK5Q9P286 719 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 ADAM28Q9UKQ2 775 aa12.38□□□□□ -0.43
NPC1-214ENST00000593280 NOVA2Q9UNW9 492 aaKnown RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
NPC1-214ENST00000593280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 TLDC2A0PJX2 215 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 DCDC2CA8MYV0 355 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 RASGRF2O14827 1237 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 RGS16O15492 202 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 PARNO95453 639 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 F9P00740 461 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 AMPD1P23109 780 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 RBL1P28749 1068 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 HPDP32754 393 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 ATP1A2P50993 1020 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ARL4CP56559 192 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 GBE1Q04446 702 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 DMTNQ08495 405 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SCAPQ12770 1279 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 HIF1AQ16665 826 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 TCTN1Q2MV58 587 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ARL13BQ3SXY8 428 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 NAT8LQ8N9F0 302 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 C9orf72Q96LT7 481 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 QKIQ96PU8 341 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPC1-214ENST00000593280 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 PHACTR1Q9C0D0 580 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 USP29Q9HBJ7 922 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 WDR6Q9NNW5 1121 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 WBP1LQ9NX94 342 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms