RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	LCLAT1	Q6UWP7	414 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TOGARAM2	Q6ZUX3	1019 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TRMT11	Q7Z4G4	463 aa	Known RBP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ARHGEF19	Q8IW93	802 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SIX6OS1	Q8N1H7	587 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	C12orf50	Q8NA57	414 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	EHBP1	Q8NDI1	1231 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KCNV2	Q8TDN2	545 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	HMGB4	Q8WW32	186 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	P2RY11	Q96G91	374 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ZSWIM1	Q9BR11	485 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	DCLK3	Q9C098	648 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	AGO1	Q9UL18	857 aa	Known RBP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	HCN2	Q9UL51	889 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ZNF510	Q9Y2H8	683 aa		13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PRRT4	C9JH25	899 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053		M0QYV0	167 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SLC30A4	O14863	429 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CALCA	P01258	141 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	AFP	P02771	609 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	LCP1	P13796	627 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BCKDHB	P21953	392 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BRD2	P25440	801 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	NTSR1	P30989	418 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CHKA	P35790	457 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RGS7	P49802	495 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	MARS	P56192	900 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CREB5	Q02930	508 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PKDCC	Q504Y2	493 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PLA2G2C	Q5R387	149 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BSPRY	Q5W0U4	402 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PMS2CL	Q68D20	193 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	C11orf74	Q86VG3	221 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	DENND1C	Q8IV53	801 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PGBD3	Q8N328	593 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TRIML1	Q8N9V2	468 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	OLIG1	Q8TAK6	271 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RNF139	Q8WU17	664 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RLN3	Q8WXF3	142 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KCTD13	Q8WZ19	329 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	EDEM1	Q92611	657 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ACOX2	Q99424	681 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	INTS2	Q9H0H0	1204 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CHMP5	Q9NZZ3	219 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KIAA1468	Q9P260	1216 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	STARD13	Q9Y3M8	1113 aa		13.71	□□□□□ -0.21
PRKCSH-218	ENST00000593053	YJEFN3	A6XGL0	299 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053		E7ENQ6	273 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	PIK3R2	O00459	728 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	PENK	P01210	267 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CISD3	P0C7P0	127 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	HOXB2	P14652	356 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	P2RY2	P41231	377 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	GCNT1	Q02742	428 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CNGA2	Q16280	664 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	FYB2	Q5VWT5	728 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	PMF1	Q6P1K2	205 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	FMNL3	Q8IVF7	1028 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CHPF	Q8IZ52	775 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	PLD4	Q96BZ4	506 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	ERLEC1	Q96DZ1	483 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CNGB3	Q9NQW8	809 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	VPS45	Q9NRW7	570 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	RXFP3	Q9NSD7	469 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	OLA1	Q9NTK5	396 aa	Known RBP	13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053	MYO16	Q9Y6X6	1858 aa		13.7	□□□□□ -0.22
PRKCSH-218	ENST00000593053		A0A1W2PQF6	199 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	BCLAF3	A2AJT9	711 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	MAP3K13	O43283	966 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	GABBR2	O75899	941 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	FGFR1OP	O95684	399 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CAVIN2	O95810	425 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	ZNF132	P52740	706 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	DAOA	P59103	153 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	STIL	Q15468	1287 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	TRIP4	Q15650	581 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	TCEAL6	Q6IPX3	200 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	SDE2	Q6IQ49	451 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CREBRF	Q8IUR6	639 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	FRMD1	Q8N878	549 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	SLC35F5	Q8WV83	523 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	TCEAL3	Q969E4	200 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	SPACA7	Q96KW9	195 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	KREMEN1	Q96MU8	473 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	SFMBT1	Q9UHJ3	866 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	RWDD2A	Q9UIY3	292 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	FBXO10	Q9UK96	956 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	HBS1L	Q9Y450	684 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	KIAA1549L	Q6ZVL6	1849 aa		13.69	□□□□□ -0.22
PRKCSH-218	ENST00000593053	CYBB	P04839	570 aa		13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	KRT5	P13647	590 aa		13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	GABRG2	P18507	467 aa		13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	DHPS	P49366	369 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	HARS2	P49590	506 aa	Known RBP	13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	MFAP3	P55082	362 aa		13.68	□□□□□ -0.22
PRKCSH-218	ENST00000593053	MAP7D1	Q3KQU3	841 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms