RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 BUB1O43683 1085 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 RTN3O95197 1032 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-220ENST00000593008 LTFP02788 710 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CYP1A2P05177 515 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CALB1P05937 261 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TMEM253P0C7T8 217 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CSH1P0DML2 217 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CSH2P0DML3 217 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 RARGP13631 454 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CD72P21854 359 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CDC25CP30307 473 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 GDI1P31150 447 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 DEKP35659 375 aaKnown RBP10.08□□□□□ -0.8
DDX39A-220ENST00000593008 ACADSBP45954 432 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 VAV2P52735 878 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 ZXDBP98169 803 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 BSPRYQ5W0U4 402 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 PLEKHA7Q6IQ23 1121 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 SLC26A9Q7LBE3 791 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 ARL14EPQ8N8R7 260 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-220ENST00000593008 MAB21L3Q8N8X9 362 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 C3orf20Q8ND61 904 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 DQX1Q8TE96 717 aaKnown RBP10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CFAP57Q96MR6 1250 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 SLC2A13Q96QE2 648 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TRMT61BQ9BVS5 477 aaKnown RBP10.08□□□□□ -0.8
DDX39A-220ENST00000593008 SLC46A2Q9BY10 475 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TASP1Q9H6P5 420 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 BRD9Q9H8M2 597 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 ANLNQ9NQW6 1124 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.08□□□□□ -0.87e-9■□□□□ 9.8
DDX39A-220ENST00000593008 SMPD4Q9NXE4 827 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 TMEM59LQ9UK28 342 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 PPP2R2CQ9Y2T4 447 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 PAXBP1Q9Y5B6 917 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 COL4A3Q01955 1670 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 ANAPC1Q9H1A4 1944 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 MACROD2A1Z1Q3 448 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 C2CD4BA6NLJ0 364 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 DPYSL4O14531 572 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CCP110O43303 1012 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 COCHO43405 550 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TLR5O60602 858 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 FBXO21O94952 628 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 DCNP07585 359 aaKnown RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 HMBSP08397 361 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 IRF1P10914 325 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 PSMC3P17980 439 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 GGCXP38435 758 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 SULT1E1P49888 294 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 ATP11AP98196 1134 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 PFKPQ01813 784 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 SPA17Q15506 151 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 MLF2Q15773 248 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CDO1Q16878 200 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CCDC14Q49A88 953 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 KIAA1328Q86T90 577 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 MIB1Q86YT6 1006 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 ARFGAP1Q8N6T3 406 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 PRSS33Q8NF86 280 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TTC8Q8TAM2 541 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 RXFP2Q8WXD0 754 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 ZFYVE19Q96K21 471 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 SLITRK1Q96PX8 696 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TBCBQ99426 244 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 SELENOOQ9BVL4 669 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 MAGEB5Q9BZ81 275 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TRPV4Q9HBA0 871 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 LZTFL1Q9NQ48 299 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 HEBP1Q9NRV9 189 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TRMT1Q9NXH9 659 aaKnown RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CTTNBP2NLQ9P2B4 639 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 RASAL2Q9UJF2 1139 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 MTF2Q9Y483 593 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-220ENST00000593008 SNX10Q9Y5X0 201 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 CAPN6Q9Y6Q1 641 aa10.07□□□□□ -0.8
DDX39A-220ENST00000593008 TMEM191CA6NGB0 347 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 I6L893 689 aaPredicted RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 HSF2BPO75031 334 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 MOCS3O95396 460 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 OAS1P00973 400 aaKnown RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 KRT3P12035 628 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 NCAM1P13591 858 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 AOC1P19801 751 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 AVPR1AP37288 418 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms