RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MSANTD2Q6P1R3 559 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 RSRC2Q7L4I2 434 aaKnown RBP7.14□□□□□ -1.27
VMP1-215ENST00000592619 RRAGAQ7L523 313 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 TMEM57Q8N5G2 664 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 CSGALNACT1Q8TDX6 532 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 SOCS4Q8WXH5 440 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 COG8Q96MW5 612 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 ADAM2Q99965 735 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 SLC26A6Q9BXS9 759 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 BRD8Q9H0E9 1235 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 ZNF703Q9H7S9 590 aaPredicted RBP7.14□□□□□ -1.27
VMP1-215ENST00000592619 NKX1-2Q9UD57 310 aaPredicted RBP7.14□□□□□ -1.27
VMP1-215ENST00000592619 FRMD4BQ9Y2L6 1034 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 TCAF1Q9Y4C2 921 aa7.14□□□□□ -1.27
VMP1-215ENST00000592619 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 SUPT6HQ7KZ85 1726 aaKnown RBP7.13□□□□□ -1.27
VMP1-215ENST00000592619 ITSN2Q9NZM3 1697 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 MTUS2Q5JR59 1369 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 WDR47O94967 919 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 NDUFA10O95299 355 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 CER1O95813 267 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 PPP3CBP16298 524 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 DEKP35659 375 aaKnown RBP7.13□□□□□ -1.27
VMP1-215ENST00000592619 SELENOPP49908 381 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 CCR5P51681 352 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 HNRNPMP52272 730 aaKnown RBP eCLIP7.13□□□□□ -1.27
VMP1-215ENST00000592619 NXPH1P58417 271 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 CHRNDQ07001 517 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 MTAPQ13126 283 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 PRKD1Q15139 912 aaPredicted RBP7.13□□□□□ -1.27
VMP1-215ENST00000592619 RPS6KA2Q15349 733 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 MAP3K21Q5TCX8 1036 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 ZKSCAN2Q63HK3 967 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 PIK3AP1Q6ZUJ8 805 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 BBS12Q6ZW61 710 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 SYNE4Q8N205 404 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 METTL25Q8N6Q8 603 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 CPEB3Q8NE35 698 aaKnown RBP7.13□□□□□ -1.27
VMP1-215ENST00000592619 OVCA2Q8WZ82 227 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 MYEOVQ96EZ4 313 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 TWNKQ96RR1 684 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 TMX4Q9H1E5 349 aaPredicted RBP7.13□□□□□ -1.27
VMP1-215ENST00000592619 NOD2Q9HC29 1040 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 CDC42BPBQ9Y5S2 1711 aa7.13□□□□□ -1.27
VMP1-215ENST00000592619 FANCAO15360 1455 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 PLCH2O75038 1416 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 CCDC196A0A1B0GTZ2 297 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 TMEM200CA6NKL6 621 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 KIAA0355O15063 1070 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 SLC16A3O15427 465 aaKnown RBP7.12□□□□□ -1.27
VMP1-215ENST00000592619 CTIFO43310 598 aaKnown RBP7.12□□□□□ -1.27
VMP1-215ENST00000592619 PROM1O43490 865 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 MBD4O95243 580 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 CNPP09543 421 aaKnown RBP7.12□□□□□ -1.27
VMP1-215ENST00000592619 VDRP11473 427 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 SERPINA4P29622 427 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 ELF1P32519 619 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 RXRGP48443 463 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 ST3GAL2Q16842 350 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 TMEM196Q5HYL7 178 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 LRRC71Q8N4P6 559 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 C11orf44Q8N8P7 122 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 USP38Q8NB14 1042 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 B3GALNT2Q8NCR0 500 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 HTRA1Q92743 480 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 DEF6Q9H4E7 631 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 GLOD4Q9HC38 313 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 DERAQ9Y315 318 aa7.12□□□□□ -1.27
VMP1-215ENST00000592619 LRRC9Q6ZRR7 1453 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 ITIH6Q6UXX5 1313 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 A1L4Q6 167 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 A6NLC8 198 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 A8MVJ9 347 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 FAM20BO75063 409 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 FAM163BP0C2L3 166 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 RXRAP19793 462 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 ZFP36P26651 326 aaKnown RBP7.11□□□□□ -1.27
VMP1-215ENST00000592619 PBX1P40424 430 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 TUBP50607 506 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 DGKQP52824 942 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 MAPK7Q13164 816 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 SLC12A1Q13621 1099 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 KCNJ12Q14500 433 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 TBRG1Q3YBR2 411 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 GALNTL6Q49A17 601 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 TEDDM1Q5T9Z0 273 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 FAM90A2PQ658T7 463 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 DGAT2L7PQ6IED9 249 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
VMP1-215ENST00000592619 LNX2Q8N448 690 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 TSPYL6Q8N831 410 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 PCYOX1LQ8NBM8 494 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 SUPT20HQ8NEM7 779 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 SNRNP27Q8WVK2 155 aaKnown RBP7.11□□□□□ -1.27
VMP1-215ENST00000592619 GOLGA1Q92805 767 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 GLG1Q92896 1179 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 ABHD16BQ9H3Z7 469 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 JMJD4Q9H9V9 463 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 LIN7CQ9NUP9 197 aaKnown RBP7.11□□□□□ -1.27
VMP1-215ENST00000592619 TMLHEQ9NVH6 421 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms