RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 UBXN1Q04323 297 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 SYCP1Q15431 976 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 PKN3Q6P5Z2 889 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 BEND5Q7L4P6 421 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 DENND1CQ8IV53 801 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 CCDC26Q8TAB7 109 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 NOX5Q96PH1 765 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 TRIM62Q9BVG3 475 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 BBS2Q9BXC9 721 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 C2orf42Q9NWW7 574 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 WDR35Q9P2L0 1181 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 SFMBT1Q9UHJ3 866 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 AGO1Q9UL18 857 aaKnown RBP15.17■□□□□ 0.02
DDX39A-217ENST00000592391 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 PCDHGA2Q9Y5H1 932 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 R4GN57 208 aa15.17■□□□□ 0.02
DDX39A-217ENST00000592391 DMDP11532 3685 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 SYCE3A1L190 88 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 NEDD8-MDP1E9PL57 170 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 K7EQS6 105 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 EPHB6O15197 1021 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 MSI1O43347 362 aaKnown RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 CACNG3O60359 315 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 TULP3O75386 442 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 KAT7O95251 611 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 APODP05090 189 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 FYNP06241 537 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 NCAM1P13591 858 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 CHKAP35790 457 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 GRIA2P42262 883 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 MRE11P49959 708 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 NRLP54845 237 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 POLR2FP61218 127 aaKnown RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 MESP2Q0VG99 397 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 TPGS1Q6ZTW0 290 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 PHTF2Q8N3S3 785 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 NAT16Q8N8M0 369 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 ZBTB44Q8NCP5 570 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 FAM149B1Q96BN6 582 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 PPP1R13BQ96KQ4 1090 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 PCMTD1Q96MG8 357 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-217ENST00000592391 ERGIC2Q96RQ1 377 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 CPXM1Q96SM3 734 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 ARHGEF4Q9NR80 690 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 ZSCAN32Q9NX65 697 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 TJP2Q9UDY2 1190 aa15.16■□□□□ 0.02
DDX39A-217ENST00000592391 A0A0A0MRY4 1105 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 K7ESF4 209 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 TYRP14679 529 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 JAM2P57087 298 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 KDSRQ06136 332 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 ALYREFQ86V81 257 aaKnown RBP15.15■□□□□ 0.02
DDX39A-217ENST00000592391 FAM217AQ8IXS0 508 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 CPXM2Q8N436 756 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 RPLP0P6Q8NHW5 317 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 DDX1Q92499 740 aaKnown RBP15.15■□□□□ 0.02
DDX39A-217ENST00000592391 NKD2Q969F2 451 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-217ENST00000592391 ACDQ96AP0 544 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 XPO6Q96QU8 1125 aaKnown RBP15.15■□□□□ 0.02
DDX39A-217ENST00000592391 PDCL3Q9H2J4 239 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 SEMA4AQ9H3S1 761 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 PIEZO1Q92508 2521 aa15.15■□□□□ 0.02
DDX39A-217ENST00000592391 MYOFQ9NZM1 2061 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 CAPN9O14815 690 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 LATS1O95835 1130 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 PENKP01210 267 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 IGLV3-27P01718 113 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 GLI1P08151 1106 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 HOXA6P31267 233 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SOX5P35711 763 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 TNFRSF4P43489 277 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SEC13P55735 322 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SNX16P57768 344 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 RING1Q06587 406 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 IQCB1Q15051 598 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 PTPN20Q4JDL3 420 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 GRAMD4Q6IC98 578 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SYT13Q7L8C5 426 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SFTPA1Q8IWL2 248 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 TERB1Q8NA31 727 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 TMEM35BQ8NCS4 154 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 EPS8L1Q8TE68 723 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 DQX1Q8TE96 717 aaKnown RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 ATRIPQ8WXE1 791 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 PIWIL1Q96J94 861 aaKnown RBP15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SERPINB11Q96P15 392 aa15.14■□□□□ 0.01
DDX39A-217ENST00000592391 SPAG5Q96R06 1193 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms