RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 APTXQ7Z2E3 356 aaKnown RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 TMEM110Q86TL2 294 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 C12orf40Q86WS4 652 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PASD1Q8IV76 773 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 FMNL3Q8IVF7 1028 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 DHX40Q8IX18 779 aaKnown RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 WDTC1Q8N5D0 677 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 NAT16Q8N8M0 369 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 EZH1Q92800 747 aaPredicted RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 GOLGA1Q92805 767 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PLD4Q96BZ4 506 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PNKPQ96T60 521 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 FUCA2Q9BTY2 467 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 GANQ9H2C0 597 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 FAM207AQ9NSI2 230 aaPredicted RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 C2orf42Q9NWW7 574 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SFMBT1Q9UHJ3 866 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 ZNF510Q9Y2H8 683 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 SIK3Q9Y2K2 1263 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 HBS1LQ9Y450 684 aaKnown RBP9.61□□□□□ -0.87
DNMT1-223ENST00000591239 R4GN57 208 aa9.61□□□□□ -0.87
DNMT1-223ENST00000591239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 PROB1E7EW31 1015 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 K7EQS6 105 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 EPHB6O15197 1021 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 PAPSS1O43252 624 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 MSI1O43347 362 aaKnown RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ATG13O75143 517 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 PAPSS2O95340 614 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 FYNP06241 537 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 TDGF1P13385 188 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 NCAM1P13591 858 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 TYRP14679 529 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 CYP11B1P15538 503 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 CHKAP35790 457 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 HARS2P49590 506 aaKnown RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 MRE11P49959 708 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 NRLP54845 237 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 POLR2FP61218 127 aaKnown RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 TRIP4Q15650 581 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 MSANTD2Q6P1R3 559 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ZC3H14Q6PJT7 736 aaKnown RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 DENND1CQ8IV53 801 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 SFTPA1Q8IWL2 248 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ETFBKMTQ8IXQ9 262 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 RPLP0P6Q8NHW5 317 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 NELL1Q92832 810 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 FAM149B1Q96BN6 582 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 PPP1R13BQ96KQ4 1090 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 PCMTD1Q96MG8 357 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 NOX5Q96PH1 765 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ERGIC2Q96RQ1 377 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 CPXM1Q96SM3 734 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 BBS2Q9BXC9 721 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 FAM126AQ9BYI3 521 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 DEC1Q9P2X7 70 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 TJP2Q9UDY2 1190 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 AGO1Q9UL18 857 aaKnown RBP9.6□□□□□ -0.87
DNMT1-223ENST00000591239 CEP83Q9Y592 693 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 ATG2BQ96BY7 2078 aa9.6□□□□□ -0.87
DNMT1-223ENST00000591239 A0A0A0MRY4 1105 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 CHURC1-FNTBB4DL54 471 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 K7ESF4 209 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 CAPN9O14815 690 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 CACNG3O60359 315 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 TULP3O75386 442 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 GFPT2O94808 682 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 KAT7O95251 611 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 APODP05090 189 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 GRIA2P42262 883 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 TNFRSF4P43489 277 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 SEC13P55735 322 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 JAM2P57087 298 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 YWHAZP63104 245 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 KDSRQ06136 332 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 IQCB1Q15051 598 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 SKOR2Q2VWA4 1001 aaPredicted RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 PREPLQ4J6C6 727 aaPredicted RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 C2orf27AQ580R0 203 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 BEND5Q7L4P6 421 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 NOP9Q86U38 636 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 ZBTB44Q8NCP5 570 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 TMEM35BQ8NCS4 154 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 NEK11Q8NG66 645 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 CCDC26Q8TAB7 109 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 USP33Q8TEY7 942 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 ATRIPQ8WXE1 791 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 DDX1Q92499 740 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 BHMTQ93088 406 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 XPO6Q96QU8 1125 aaKnown RBP9.59□□□□□ -0.87
DNMT1-223ENST00000591239 SPAG5Q96R06 1193 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 TRIM62Q9BVG3 475 aa9.59□□□□□ -0.87
DNMT1-223ENST00000591239 PDCL3Q9H2J4 239 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms