RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TNFRSF4P43489 277 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 MRPS21P82921 87 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 KCNMA1Q12791 1236 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 RAPGEF1Q13905 1077 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 STX1AQ16623 288 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 GRAMD4Q6IC98 578 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 Q6ZNB5 142 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 CEP68Q76N32 757 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 CAMKK1Q8N5S9 505 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 CLEC4CQ8WTT0 213 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 SHC3Q92529 594 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 RUBCNQ92622 972 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 FAM149B1Q96BN6 582 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 HHIPQ96QV1 700 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 PDCL3Q9H2J4 239 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 NCDNQ9UBB6 729 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 AGO1Q9UL18 857 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 MYO16Q9Y6X6 1858 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 KLF8O95600 359 aaPredicted RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 CYBBP04839 570 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 NCAM1P13591 858 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 CNR2P34972 360 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 CLCN1P35523 988 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 KRT9P35527 623 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 BPIFB4P59827 614 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 DRAP1Q14919 205 aaPredicted RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 KRT31Q15323 416 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 TRIP4Q15650 581 aaPredicted RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 C10orf76Q5T2E6 689 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 C11orf57Q6ZUT1 292 aaPredicted RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 WDR5BQ86VZ2 330 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 ETFBKMTQ8IXQ9 262 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 ALLCQ8N6M5 410 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 TSTD1Q8NFU3 115 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 STK32AQ8WU08 396 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 PLD4Q96BZ4 506 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 MARK1Q9P0L2 795 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 SMG5Q9UPR3 1016 aaKnown RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 HBS1LQ9Y450 684 aaKnown RBP12.62□□□□□ -0.39
TPM4-212ENST00000590180 GVINP1Q7Z2Y8 2422 aa12.62□□□□□ -0.39
TPM4-212ENST00000590180 MYO18AQ92614 2054 aaKnown RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 OTOGLQ3ZCN5 2332 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 CAPN9O14815 690 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 AXIN1O15169 862 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 SART1O43290 800 aaKnown RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 MSI1O43347 362 aaKnown RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 TSPAN3O60637 253 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 APBB3O95704 486 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 DGKGP49619 791 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 DGKEP52429 567 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 FKBP15Q5T1M5 1219 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 CDKAL1Q5VV42 579 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 SLC47A2Q86VL8 602 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
TPM4-212ENST00000590180 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 CYTH4Q9UIA0 394 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
TPM4-212ENST00000590180 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 E5RJQ4 531 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 CACNG3O60359 315 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 CISD3P0C7P0 127 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 WASP42768 502 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 KIR2DL1P43626 348 aaPredicted RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 TBX4P57082 545 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 MYL5Q02045 173 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 TYRO3Q06418 890 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 CRY1Q16526 586 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 MEA1Q16626 185 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 EOGTQ5NDL2 527 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 OR6B2Q6IFH4 312 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 SDE2Q6IQ49 451 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 DPY19L2P1Q6NXN4 242 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms