RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 VPS9D1Q9Y2B5 631 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 KATNA1O75449 491 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 TSPAN9O75954 239 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 MOCS2O96007 188 aaPredicted RBP15.02■□□□□ -0
SMARCA4-214ENST00000589677 AVPR1AP37288 418 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 DDR2Q16832 855 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 ENKURQ8TC29 256 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 ANKRD6Q9Y2G4 727 aa15.02■□□□□ -0
SMARCA4-214ENST00000589677 REXO2Q9Y3B8 237 aaKnown RBP15.02■□□□□ -0
SMARCA4-214ENST00000589677 MAGEB16A2A368 324 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 MATN2O00339 956 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 INPP4BO15327 924 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 GSC2O15499 205 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 DDHD2O94830 711 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 CCT8P50990 548 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 AARS2Q5JTZ9 985 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 TRIQKQ629K1 86 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 SNRNP48Q6IEG0 339 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 ZNF720Q7Z2F6 126 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 OR7A2PQ8NGA2 310 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 MXRA8Q9BRK3 442 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 UGT2B28Q9BY64 529 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 PKP3Q9Y446 797 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 NCANO14594 1321 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 ACAT1P24752 427 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 GALK1P51570 392 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 OTUD3Q5T2D3 398 aaPredicted RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 MFSD5Q6N075 450 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM26Q6ZUK4 368 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 ARCQ7LC44 396 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 TADA1Q96BN2 335 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 COX4I2Q96KJ9 171 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 CHID1Q9BWS9 393 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 KCTD10Q9H3F6 313 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 IARS2Q9NSE4 1012 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 NARFQ9UHQ1 456 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 TSR3Q9UJK0 312 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 NDUFAF1Q9Y375 327 aa15.02□□□□□ -0.01
SMARCA4-214ENST00000589677 MSH4O15457 936 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 GLRBP48167 497 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 BLVRAP53004 296 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 CACNB3P54284 484 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 CYP51A1Q16850 503 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 TTC23LQ6PF05 361 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 C8orf59Q8N0T1 100 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ZSCAN18Q8TBC5 510 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 PPP1R10Q96QC0 940 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 PHACTR1Q9C0D0 580 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 WDR12Q9GZL7 423 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 CHST7Q9NS84 486 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 HOXC10Q9NYD6 342 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ADAMTS13Q76LX8 1427 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 AGPSO00116 658 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 AREL1O15033 823 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 GEMP55040 296 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ARPP19P56211 112 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 LRRC74AQ0VAA2 488 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 C1DQ13901 141 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 TMEM132DQ14C87 1099 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 EMC2Q15006 297 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 POLD3Q15054 466 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 KLHL12Q53G59 568 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 MIIPQ5JXC2 388 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SFRP1Q8N474 314 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 FAM49AQ9H0Q0 323 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 AAR2Q9Y312 384 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 C15orf38-AP3S2A0A0A6YYH1 394 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SNAP91O60641 907 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 RHOBTB1O94844 696 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 COX4I1P13073 169 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 RAB15P59190 212 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 DLG4P78352 724 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ACAP1Q15027 740 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 FAM182BQ5T319 152 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 MFSD4BQ5TF39 518 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ARPINQ7Z6K5 226 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 KATNAL2Q8IYT4 538 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 RNF148Q8N7C7 305 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SLC35C1Q96A29 364 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 GINS4Q9BRT9 223 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 CATSPERBQ9H7T0 1116 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 ADSSP30520 456 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 TALDO1P37837 337 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SCN4BQ8IWT1 228 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SYTL1Q8IYJ3 562 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 WRNIP1Q96S55 665 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 SEPHS2Q99611 448 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 CPNE1Q99829 537 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.01□□□□□ -0.016e-8■■■■□ 22.5
SMARCA4-214ENST00000589677 USP18Q9UMW8 372 aa15.01□□□□□ -0.01
SMARCA4-214ENST00000589677 FAM205AQ6ZU69 1335 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 A8MUI8 341 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 GARTP22102 1010 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 CYP2R1Q6VVX0 501 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 ABRAQ8N0Z2 381 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 GANQ9H2C0 597 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 POLR1BQ9H9Y6 1135 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 SELENONQ9NZV5 590 aa15□□□□□ -0.01
SMARCA4-214ENST00000589677 PRPF19Q9UMS4 504 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms