RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GCOM2Q9BZD3 368 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 VPS11Q9H270 941 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 PRDM16Q9HAZ2 1276 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 IL21Q9HBE4 155 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SLC5A4Q9NY91 659 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 BAIAP2L1Q9UHR4 511 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZMYND8Q9ULU4 1186 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 E5RJQ4 531 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TRDMT1O14717 391 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 MDM4O15151 490 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 HNRNPCL1O60812 293 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 KRT37O76014 449 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZBED1O96006 694 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 GSTA2P09210 222 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NQO1P15559 274 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 GCAP28676 217 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SSTR1P30872 391 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NR2C2P49116 596 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 WDR4P57081 412 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ATP11AP98196 1134 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SLC6A3Q01959 620 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 DNAJC3Q13217 504 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF792Q3KQV3 632 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 FNBP1LQ5T0N5 605 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TAPT1Q6NXT6 567 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 FAM47EQ6ZV65 393 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZC3H18Q86VM9 953 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 CEP57Q86XR8 500 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 C4orf33Q8N1A6 199 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TWNKQ96RR1 684 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF670Q9BS34 389 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 TRIM6Q9C030 488 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 NGRNQ9NPE2 291 aaKnown RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-206ENST00000589117 SLC45A1Q9Y2W3 748 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
ZNF540-206ENST00000589117 BCLAF3A2AJT9 711 aaKnown RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TYROBPO43914 113 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TSPAN1O60635 241 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 EDF1O60869 148 aaKnown RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CSDE1O75534 798 aaKnown RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF189O75820 626 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CD4P01730 458 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CD48P09326 243 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 VARSP26640 1264 aaKnown RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ADORA2AP29274 412 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 PNPLA4P41247 253 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ACADSBP45954 432 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 GPX6P59796 221 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 YWHAGP61981 247 aaKnown RBP eCLIP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CBLBQ13191 982 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TLR1Q15399 786 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 GRIK4Q16099 956 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CDO1Q16878 200 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 GOLGA7BQ2TAP0 167 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 SPDYAQ5MJ70 313 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 NOTUMQ6P988 496 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 SLC27A1Q6PCB7 646 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 LVRNQ6Q4G3 990 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 FAM183BPQ6ZVS7 135 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TMEM110Q86TL2 294 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CDKL3Q8IVW4 592 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TRIM42Q8IWZ5 723 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 FITM2Q8N6M3 262 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 TJP2Q9UDY2 1190 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 HMGXB4Q9UGU5 601 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 HEY1Q9Y5J3 304 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 SNX9Q9Y5X1 595 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 PTPRFP10586 1907 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 FOXO6A8MYZ6 492 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 KCNN4O15554 427 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 LPXNO60711 386 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 UNC5CO95185 931 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ATP6V1G2O95670 118 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 GNRH1P01148 92 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 AXLP30530 894 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 FOXN2P32314 431 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ELK3P41970 407 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 SPRED3Q2MJR0 410 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 IQSEC1Q6DN90 963 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ARCQ7LC44 396 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 SLC26A11Q86WA9 606 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 LRRC6Q86X45 466 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 VPS52Q8N1B4 723 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 PLD5Q8N7P1 536 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 OR6B3Q8NGW1 331 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 FAM172AQ8WUF8 416 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF75CPQ92670 426 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 RTP4Q96DX8 246 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 C16orf70Q9BSU1 422 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 DHRS4Q9BTZ2 278 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms