RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 JAKMIP2Q96AA8 810 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 PAGE5Q96GU1 130 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 FAM13BQ9NYF5 915 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 USP36Q9P275 1121 aaKnown RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 LSM7Q9UK45 103 aaKnown RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 SLC27A6Q9Y2P4 619 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 USP3Q9Y6I4 520 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 FASNP49327 2511 aaKnown RBP19.39■□□□□ 0.69
CCDC43-204ENST00000588687 CILPO75339 1184 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 ZSCAN22P10073 491 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-204ENST00000588687 ATXN3P54252 364 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-204ENST00000588687 GOLGA8FQ08AF8 430 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 GOLGA8DPQ0D2H9 430 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 PKP1Q13835 747 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 RBBP8NLQ8NC74 664 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-204ENST00000588687 TAS1R2Q8TE23 839 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 BHMTQ93088 406 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 EXOC1Q9NV70 894 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 PLK2Q9NYY3 685 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 DNMT3LQ9UJW3 386 aa19.39■□□□□ 0.69
CCDC43-204ENST00000588687 MAPK13O15264 365 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 MFAP3P55082 362 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 PPP3CAQ08209 521 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 GEN1Q17RS7 908 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 FUT11Q495W5 492 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 METTL3Q86U44 580 aaKnown RBP19.38■□□□□ 0.69
CCDC43-204ENST00000588687 CYFIP2Q96F07 1278 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 CAMK1GQ96NX5 476 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 NT5C1AQ9BXI3 368 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 MKRN2Q9H000 416 aaKnown RBP19.38■□□□□ 0.69
CCDC43-204ENST00000588687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.38■□□□□ 0.692e-12■■■■■ 298.1
CCDC43-204ENST00000588687 TRAF3IP3Q9Y228 551 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 STON1Q9Y6Q2 735 aa19.38■□□□□ 0.69
CCDC43-204ENST00000588687 PLXNB3Q9ULL4 1909 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 IGSF10Q6WRI0 2623 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 H0Y626 953 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 TAF4O00268 1085 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 TRIM16O95361 564 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
CCDC43-204ENST00000588687 TRIM49P0CI25 452 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 TRIM49CP0CI26 452 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 IL12RB1P42701 662 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 PLA2G4AP47712 749 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 GRIK2Q13002 908 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 SLC14A1Q13336 389 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 C10orf120Q5SQS8 335 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 SDE2Q6IQ49 451 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 CEP57L1Q8IYX8 460 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 CHCHD4Q8N4Q1 142 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 DNASE2BQ8WZ79 361 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 NIF3L1Q9GZT8 377 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 CYP3A43Q9HB55 503 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 CLIC5Q9NZA1 410 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 NAGPAQ9UK23 515 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 RCOR1Q9UKL0 485 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 HPSEQ9Y251 543 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 NFE2L3Q9Y4A8 694 aa19.37■□□□□ 0.69
CCDC43-204ENST00000588687 KCNJ18B7U540 433 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 SYPP08247 313 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 CD6P30203 668 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 PSEN1P49768 467 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 VAMP7P51809 220 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 MCCD1P59942 119 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 NFIL3Q16649 462 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 ZNF423Q2M1K9 1284 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 PLEKHG6Q3KR16 790 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 PPP1R26Q5T8A7 1209 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 CEP135Q66GS9 1140 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 KIAA1324Q6UXG2 1013 aaKnown RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 FOXJ1Q92949 421 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 SNX21Q969T3 373 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 PIWIL1Q96J94 861 aaKnown RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 FAM124BQ9H5Z6 455 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 WSB2Q9NYS7 404 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 THAP10Q9P2Z0 257 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-204ENST00000588687 SUSD2Q9UGT4 822 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 CLEC4EQ9ULY5 219 aa19.36■□□□□ 0.69
CCDC43-204ENST00000588687 SH3BP5O60239 455 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 CBFA2T3O75081 653 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 IGLV3-19P01714 112 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 PFKFB1P16118 471 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 CD58P19256 250 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 MAOBP27338 520 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 GCLMP48507 274 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
CCDC43-204ENST00000588687 HNRNPDQ14103 355 aaKnown RBP19.35■□□□□ 0.69
CCDC43-204ENST00000588687 NAXDQ8IW45 347 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 FAM217AQ8IXS0 508 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 TOE1Q96GM8 510 aaKnown RBP19.35■□□□□ 0.69
CCDC43-204ENST00000588687 DUSP16Q9BY84 665 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 PTPRBP23467 1997 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 APC2O95996 2303 aa19.35■□□□□ 0.69
CCDC43-204ENST00000588687 C7P10643 843 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 PDIA4P13667 645 aaKnown RBP19.34■□□□□ 0.69
CCDC43-204ENST00000588687 CORO1AP31146 461 aaKnown RBP19.34■□□□□ 0.69
CCDC43-204ENST00000588687 COPAP53621 1224 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 BNC1Q01954 994 aa19.34■□□□□ 0.69
CCDC43-204ENST00000588687 RING1Q06587 406 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms