RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 DNALI1O14645 258 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TNNC2P02585 160 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 URODP06132 367 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 IGFBP6P24592 240 aaPredicted RBP15.23■□□□□ 0.03
CCDC43-203ENST00000588210 GLUD2P49448 558 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 DSG1Q02413 1049 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 BNIP1Q12981 228 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 FAM171A1Q5VUB5 890 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TDRPQ86YL5 185 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 SRRM1Q8IYB3 904 aaKnown RBP15.23■□□□□ 0.03
CCDC43-203ENST00000588210 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 MAML1Q92585 1016 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 GRAMD1AQ96CP6 724 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 CFAP57Q96MR6 1250 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 SLITRK1Q96PX8 696 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 ITGA11Q9UKX5 1188 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 NQO1P15559 274 aaKnown RBP15.23■□□□□ 0.03
CCDC43-203ENST00000588210 MMP8P22894 467 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 PTPN7P35236 360 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 GJC1P36383 396 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 AP3M2P53677 418 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 LRRC38Q5VT99 294 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 KIAA0319Q5VV43 1072 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 RNF43Q68DV7 783 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 CGB2Q6NT52 195 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 GSTA5Q7RTV2 222 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TMEM130Q8N3G9 435 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 ECT2Q9H8V3 914 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 RXFP1Q9HBX9 757 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
CCDC43-203ENST00000588210 ATG2AQ2TAZ0 1938 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 TMEM191CA6NGB0 347 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 C2orf71A6NGG8 1288 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 TJP3O95049 919 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 ITGB3P05106 788 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
CCDC43-203ENST00000588210 PNPLA4P41247 253 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
CCDC43-203ENST00000588210 BRCC3P46736 316 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 LILRA4P59901 499 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 COPS2P61201 443 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-203ENST00000588210 TMED2Q15363 201 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 CCDC142Q17RM4 750 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 TBC1D1Q86TI0 1168 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-203ENST00000588210 ALLCQ8N6M5 410 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 OR5B17Q8NGF7 314 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 MAFAQ8NHW3 353 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-203ENST00000588210 SUSD3Q96L08 255 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 TTPALQ9BTX7 342 aa15.22■□□□□ 0.03
CCDC43-203ENST00000588210 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 TCRBV5S1A1TA0A578 114 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 FAM47DPA6NHR8 397 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 HIDE1A8MVS5 230 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 RASA4BC9J798 803 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 NDC80O14777 642 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 PPEF2O14830 753 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 SYN3O14994 580 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 RASA4O43374 803 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 LILRB3O75022 631 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 LSM8O95777 96 aaKnown RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 KRT1P04264 644 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CALB1P05937 261 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ALADP13716 330 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 TAC1P20366 129 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 FGFR3P22607 806 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CA8P35219 290 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 SLC18A1P54219 525 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ZNF252P-AS1Q0IIN9 211 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CCDC15Q0P6D6 951 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CEP57Q86XR8 500 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 AUTS2Q8WXX7 1259 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ZNF560Q96MR9 790 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 CDCA3Q99618 268 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 TLE6Q9H808 572 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 SAYSD1Q9NPB0 183 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 M0QZQ0 153 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 GCAP28676 217 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 SSTR3P32745 418 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-203ENST00000588210 TAF6P49848 677 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 RBP5P82980 135 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 IL9RQ01113 521 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 NCOA4Q13772 614 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms