RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RSRC2Q7L4I2 434 aaKnown RBP11.77□□□□□ -0.53
VMP1-207ENST00000588131 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 ITIH5Q86UX2 942 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 TMC8Q8IU68 726 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 PDZD8Q8NEN9 1154 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 EXD1Q8NHP7 514 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 OVCA2Q8WZ82 227 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 ZNF512Q96ME7 567 aaPredicted RBP11.77□□□□□ -0.53
VMP1-207ENST00000588131 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 TUBB2BQ9BVA1 445 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 LRRC3Q9BY71 257 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 MAGEB5Q9BZ81 275 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 TLE6Q9H808 572 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 DDX56Q9NY93 547 aaKnown RBP11.77□□□□□ -0.53
VMP1-207ENST00000588131 ASB3Q9Y575 518 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 HCFC2Q9Y5Z7 792 aa11.77□□□□□ -0.53
VMP1-207ENST00000588131 LRRD1A4D1F6 860 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
VMP1-207ENST00000588131 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
VMP1-207ENST00000588131 TLR5O60602 858 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 ZRANB2O95218 330 aaKnown RBP eCLIP11.76□□□□□ -0.53
VMP1-207ENST00000588131 F11P03951 625 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 KDELR1P24390 212 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
VMP1-207ENST00000588131 CXCR3P49682 368 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 C10orf120Q5SQS8 335 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 ERMARDQ5T6L9 678 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 MFSD7Q6UXD7 560 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 SPOCD1Q6ZMY3 1216 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 RCOR2Q8IZ40 523 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 CMASQ8NFW8 434 aaPredicted RBP11.76□□□□□ -0.53
VMP1-207ENST00000588131 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 ACTRT1Q8TDG2 376 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 TEKT4Q8WW24 435 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 MRPL38Q96DV4 380 aaKnown RBP11.76□□□□□ -0.53
VMP1-207ENST00000588131 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.76□□□□□ -0.53
VMP1-207ENST00000588131 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
VMP1-207ENST00000588131 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 UXTQ9UBK9 157 aaPredicted RBP11.76□□□□□ -0.53
VMP1-207ENST00000588131 RASAL2Q9UJF2 1139 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 FZD10Q9ULW2 581 aa11.76□□□□□ -0.53
VMP1-207ENST00000588131 TCRBV7S2A1N4TA0A589 114 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 PGRMC1O00264 195 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 F9P00740 461 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 FGGP02679 453 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 KRT10P13645 584 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 GABRR2P28476 465 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 GBP1P32455 592 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 CYP4F8P98187 520 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 CKAP4Q07065 602 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 LONRF2Q1L5Z9 754 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 CCDC181Q5TID7 509 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 RTL10Q7L3V2 364 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 ADAT2Q7Z6V5 191 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 SLC13A5Q86YT5 568 aaPredicted RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 PYROXD2Q8N2H3 581 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 ELMOD1Q8N336 334 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 HDAC7Q8WUI4 952 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 NTAN1Q96AB6 310 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 RBM41Q96IZ5 413 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 FCRL2Q96LA5 508 aaPredicted RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 SERPINB11Q96P15 392 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 KCTD15Q96SI1 283 aaPredicted RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 CORO1BQ9BR76 489 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 DHX35Q9H5Z1 703 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 OLA1Q9NTK5 396 aaKnown RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 MTMR10Q9NXD2 777 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 TTC7AQ9ULT0 858 aaPredicted RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 AP4E1Q9UPM8 1137 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
VMP1-207ENST00000588131 SNX10Q9Y5X0 201 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 ANAPC1Q9H1A4 1944 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 CEP290O15078 2479 aa11.75□□□□□ -0.53
VMP1-207ENST00000588131 hCG_1818297A0A087WSY0 165 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 C2orf78A6NCI8 922 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 COCHO43405 550 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 MYL4P12829 197 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 GJA1P17302 382 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 HOXA9P31269 272 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 L1CAMP32004 1257 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 ADRA1BP35368 520 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 CCR2P41597 374 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 CDKN2BP42772 138 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 PAFAH1B1P43034 410 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 PPP3CCP48454 512 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 TUBP50607 506 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms