RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RAD54BQ9Y620 910 aa15.05■□□□□ -0
VMP1-206ENST00000587945 MYOFQ9NZM1 2061 aa15.04■□□□□ -0
VMP1-206ENST00000587945 ATXN2Q99700 1313 aaKnown RBP15.04■□□□□ -0
VMP1-206ENST00000587945 SLC12A8A0AV02 714 aa15.04■□□□□ -0
VMP1-206ENST00000587945 WASH3PC4AMC7 463 aa15.04■□□□□ -0
VMP1-206ENST00000587945 ZBED1O96006 694 aa15.04■□□□□ -0
VMP1-206ENST00000587945 CD19P15391 556 aa15.04■□□□□ -0
VMP1-206ENST00000587945 COG7P83436 770 aa15.04■□□□□ -0
VMP1-206ENST00000587945 LRRC63Q05C16 580 aa15.04■□□□□ -0
VMP1-206ENST00000587945 SGO2Q562F6 1265 aa15.04■□□□□ -0
VMP1-206ENST00000587945 FYB2Q5VWT5 728 aa15.04■□□□□ -0
VMP1-206ENST00000587945 SDE2Q6IQ49 451 aa15.04■□□□□ -0
VMP1-206ENST00000587945 RSRC2Q7L4I2 434 aaKnown RBP15.04■□□□□ -0
VMP1-206ENST00000587945 BHLHA9Q7RTU4 235 aa15.04■□□□□ -0
VMP1-206ENST00000587945 DENND1CQ8IV53 801 aa15.04■□□□□ -0
VMP1-206ENST00000587945 ARHGAP18Q8N392 663 aa15.04■□□□□ -0
VMP1-206ENST00000587945 IPO4Q8TEX9 1081 aaKnown RBP15.04■□□□□ -0
VMP1-206ENST00000587945 TIGD1Q96MW7 591 aa15.04■□□□□ -0
VMP1-206ENST00000587945 CDK5RAP1Q96SZ6 601 aaKnown RBP15.04■□□□□ -0
VMP1-206ENST00000587945 SLC6A17Q9H1V8 727 aa15.04■□□□□ -0
VMP1-206ENST00000587945 CD248Q9HCU0 757 aa15.04■□□□□ -0
VMP1-206ENST00000587945 TMEM74BQ9NUR3 256 aa15.04■□□□□ -0
VMP1-206ENST00000587945 AGO1Q9UL18 857 aaKnown RBP15.04■□□□□ -0
VMP1-206ENST00000587945 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
VMP1-206ENST00000587945 EML5Q05BV3 1969 aa15.04■□□□□ -0
VMP1-206ENST00000587945 MYO16Q9Y6X6 1858 aa15.03■□□□□ -0
VMP1-206ENST00000587945 XPO1O14980 1071 aaKnown RBP15.03■□□□□ -0
VMP1-206ENST00000587945 KCNK5O95279 499 aa15.03■□□□□ -0
VMP1-206ENST00000587945 PENKP01210 267 aaPredicted RBP15.03■□□□□ -0
VMP1-206ENST00000587945 NDUFV2P19404 249 aa15.03■□□□□ -0
VMP1-206ENST00000587945 FMO5P49326 533 aa15.03■□□□□ -0
VMP1-206ENST00000587945 BCAT1P54687 386 aa15.03■□□□□ -0
VMP1-206ENST00000587945 SLC8A3P57103 927 aa15.03■□□□□ -0
VMP1-206ENST00000587945 ADIGQ0VDE8 80 aa15.03■□□□□ -0
VMP1-206ENST00000587945 BYSLQ13895 437 aaKnown RBP15.03■□□□□ -0
VMP1-206ENST00000587945 PM20D1Q6GTS8 502 aa15.03■□□□□ -0
VMP1-206ENST00000587945 KLHL10Q6JEL2 608 aa15.03■□□□□ -0
VMP1-206ENST00000587945 UBR7Q8N806 425 aa15.03■□□□□ -0
VMP1-206ENST00000587945 GABRG3Q99928 467 aa15.03■□□□□ -0
VMP1-206ENST00000587945 DCLK3Q9C098 648 aa15.03■□□□□ -0
VMP1-206ENST00000587945 FAM124BQ9H5Z6 455 aaPredicted RBP15.03■□□□□ -0
VMP1-206ENST00000587945 LRRC4Q9HBW1 653 aa15.03■□□□□ -0
VMP1-206ENST00000587945 CD93Q9NPY3 652 aa15.03■□□□□ -0
VMP1-206ENST00000587945 HESX1Q9UBX0 185 aa15.03■□□□□ -0
VMP1-206ENST00000587945 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
VMP1-206ENST00000587945 FBXO10Q9UK96 956 aa15.03■□□□□ -0
VMP1-206ENST00000587945 STRIP2Q9ULQ0 834 aa15.03■□□□□ -0
VMP1-206ENST00000587945 CLEC4EQ9ULY5 219 aa15.03■□□□□ -0
VMP1-206ENST00000587945 ZNF510Q9Y2H8 683 aa15.03■□□□□ -0
VMP1-206ENST00000587945 KIAA1549LQ6ZVL6 1849 aa15.03■□□□□ -0
VMP1-206ENST00000587945 O00370 1275 aa15.02■□□□□ -0
VMP1-206ENST00000587945 CDX4O14627 284 aaPredicted RBP15.02■□□□□ -0
VMP1-206ENST00000587945 PSMA7O14818 248 aa15.02■□□□□ -0
VMP1-206ENST00000587945 GIPC1O14908 333 aa15.02■□□□□ -0
VMP1-206ENST00000587945 CALCAP01258 141 aa15.02■□□□□ -0
VMP1-206ENST00000587945 VDRP11473 427 aa15.02■□□□□ -0
VMP1-206ENST00000587945 BMP6P22004 513 aa15.02■□□□□ -0
VMP1-206ENST00000587945 ITPKAP23677 461 aa15.02■□□□□ -0
VMP1-206ENST00000587945 MFAP3P55082 362 aa15.02■□□□□ -0
VMP1-206ENST00000587945 YWHAEP62258 255 aaKnown RBP15.02■□□□□ -0
VMP1-206ENST00000587945 RPL6Q02878 288 aaKnown RBP15.02■□□□□ -0
VMP1-206ENST00000587945 BST2Q10589 180 aaKnown RBP15.02■□□□□ -0
VMP1-206ENST00000587945 STIM1Q13586 685 aa15.02■□□□□ -0
VMP1-206ENST00000587945 GEN1Q17RS7 908 aa15.02■□□□□ -0
VMP1-206ENST00000587945 TRIM61Q5EBN2 209 aa15.02■□□□□ -0
VMP1-206ENST00000587945 LYSMD4Q5XG99 296 aa15.02■□□□□ -0
VMP1-206ENST00000587945 PSAPL1Q6NUJ1 521 aa15.02■□□□□ -0
VMP1-206ENST00000587945 FMNL3Q8IVF7 1028 aa15.02■□□□□ -0
VMP1-206ENST00000587945 TFAP2BQ92481 460 aa15.02■□□□□ -0
VMP1-206ENST00000587945 EDEM1Q92611 657 aa15.02■□□□□ -0
VMP1-206ENST00000587945 KAT5Q92993 513 aa15.02■□□□□ -0
VMP1-206ENST00000587945 DHTKD1Q96HY7 919 aaPredicted RBP15.02■□□□□ -0
VMP1-206ENST00000587945 TMEM9BQ9NQ34 198 aa15.02■□□□□ -0
VMP1-206ENST00000587945 FSCN3Q9NQT6 498 aa15.02■□□□□ -0
VMP1-206ENST00000587945 CYP8B1Q9UNU6 501 aa15.02■□□□□ -0
VMP1-206ENST00000587945 TPRP12270 2363 aaKnown RBP15.02□□□□□ -0.01
VMP1-206ENST00000587945 SPAG17Q6Q759 2223 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 RALGAPA1Q6GYQ0 2036 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 IGHV1OR15-9A0A0B4J2B8 117 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 YJEFN3A6XGL0 299 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 PPP1R3GB7ZBB8 358 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 E7ENQ6 273 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 RNF225M0QZC1 329 aaPredicted RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 PIK3R2O00459 728 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 BIN1O00499 593 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 ZBTB24O43167 697 aaPredicted RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 GADD45BO75293 160 aaPredicted RBP15.01□□□□□ -0.01
VMP1-206ENST00000587945 LCP1P13796 627 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 CHKAP35790 457 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 RGS7P49802 495 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 UAP1L1Q3KQV9 507 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 CCDC40Q4G0X9 1142 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 DAB2IPQ5VWQ8 1189 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 BSPRYQ5W0U4 402 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 TTI2Q6NXR4 508 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 TMEM270Q6UE05 265 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 SYT12Q8IV01 421 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 CEP63Q96MT8 703 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 NT5C1BQ96P26 610 aa15.01□□□□□ -0.01
VMP1-206ENST00000587945 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms