RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.56
TPM4-206ENST00000587201 PLK2Q9NYY3 685 aa18.52■□□□□ 0.56
TPM4-206ENST00000587201 AGO1Q9UL18 857 aaKnown RBP18.52■□□□□ 0.56
TPM4-206ENST00000587201 CNTN6Q9UQ52 1028 aa18.52■□□□□ 0.56
TPM4-206ENST00000587201 SGK1O00141 431 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 ALDH1A2O94788 518 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 ARHGAP44Q17R89 818 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 EXOC3L4Q17RC7 722 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 GJB7Q6PEY0 223 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 TMEM92Q6UXU6 159 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 KBTBD6Q86V97 674 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 FAM114A1Q8IWE2 563 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 ZNF513Q8N8E2 541 aaPredicted RBP18.51■□□□□ 0.55
TPM4-206ENST00000587201 PLD4Q96BZ4 506 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 TPSD1Q9BZJ3 242 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 POLMQ9NP87 494 aaPredicted RBP18.51■□□□□ 0.55
TPM4-206ENST00000587201 PARD6AQ9NPB6 346 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 SFMBT1Q9UHJ3 866 aa18.51■□□□□ 0.55
TPM4-206ENST00000587201 ZNF292O60281 2723 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 GTPBP10A4D1E9 387 aaKnown RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 MED7O43513 233 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 GABBR2O75899 941 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 TGM1P22735 817 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 ERCC5P28715 1186 aaPredicted RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 USP8P40818 1118 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 DGKGP49619 791 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 TRMT11Q7Z4G4 463 aaKnown RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 KCNV2Q8TDN2 545 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 IRGQQ8WZA9 623 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 GOLGA1Q92805 767 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 MIS12Q9H081 205 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 ST7Q9NRC1 585 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 APEX2Q9UBZ4 518 aa18.5■□□□□ 0.55
TPM4-206ENST00000587201 HBS1LQ9Y450 684 aaKnown RBP18.5■□□□□ 0.55
TPM4-206ENST00000587201 DCLK1O15075 740 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 THAP12O43422 761 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 LRP3O75074 770 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 ADAM23O75077 832 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 FBXO21O94952 628 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 CYBBP04839 570 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
TPM4-206ENST00000587201 HNRNPLP14866 589 aaKnown RBP eCLIP18.49■□□□□ 0.55
TPM4-206ENST00000587201 GNA15P30679 374 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 GPD2P43304 727 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 HARS2P49590 506 aaKnown RBP18.49■□□□□ 0.55
TPM4-206ENST00000587201 APBA1Q02410 837 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 TRIP4Q15650 581 aaPredicted RBP18.49■□□□□ 0.55
TPM4-206ENST00000587201 MAN2A1Q16706 1144 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 USP39Q53GS9 565 aaKnown RBP18.49■□□□□ 0.55
TPM4-206ENST00000587201 HSP90AA4PQ58FG1 418 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 TOGARAM2Q6ZUX3 1019 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 RMDN1Q96DB5 314 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 LOXL4Q96JB6 756 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 SEMA4GQ9NTN9 838 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 BCCIPQ9P287 314 aaKnown RBP eCLIP18.49■□□□□ 0.55
TPM4-206ENST00000587201 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
TPM4-206ENST00000587201 PRRT4C9JH25 899 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 PENKP01210 267 aaPredicted RBP18.48■□□□□ 0.55
TPM4-206ENST00000587201 LTFP02788 710 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 CISD3P0C7P0 127 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 PON1P27169 355 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 GBP1P32455 592 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 WASP42768 502 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 LMNB2Q03252 620 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 PLK5Q496M5 336 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 FYB2Q5VWT5 728 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 EGFLAMQ63HQ2 1017 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 DENND1BQ6P3S1 775 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 CPXM2Q8N436 756 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 P2RY11Q96G91 374 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 ARRDC1-AS1Q9H2J1 176 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 ACP6Q9NPH0 428 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 FBXO10Q9UK96 956 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 INVSQ9Y283 1065 aa18.48■□□□□ 0.55
TPM4-206ENST00000587201 TCRBV21S2A2A0A5A6 115 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 PRR5-ARHGAP8B1AHC4 643 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 MSI1O43347 362 aaKnown RBP18.47■□□□□ 0.55
TPM4-206ENST00000587201 RHOBTB1O94844 696 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 EPN2O95208 641 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 NTSR1P30989 418 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 ACADSBP45954 432 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 ARHGAP8P85298 464 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 ELF2Q15723 593 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 CSRP2Q16527 193 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 MEA1Q16626 185 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 RSPO4Q2I0M5 234 aaPredicted RBP18.47■□□□□ 0.55
TPM4-206ENST00000587201 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 SDE2Q6IQ49 451 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 MSANTD2Q6P1R3 559 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 SCUBE3Q8IX30 993 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 CHPFQ8IZ52 775 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 PGBD3Q8N328 593 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 DDI1Q8WTU0 396 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms