RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 DCP1BQ8IZD4 617 aaKnown RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 ROPN1BQ9BZX4 212 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 PHACTR1Q9C0D0 580 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 ROPN1Q9HAT0 212 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-208ENST00000586548 SYNJ2BP-COX16A0A087WUM0 186 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 PARNO95453 639 aaKnown RBP23.12■■□□□ 1.29
CIRBP-208ENST00000586548 ACSL3O95573 720 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 TTC3P53804 2025 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 XRCC4Q13426 336 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 GLIPR1L2Q4G1C9 344 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 EFHC2Q5JST6 749 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 ANKRD33Q7Z3H0 272 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 CDKL3Q8IVW4 592 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-208ENST00000586548 PYROXD2Q8N2H3 581 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 CPT1BQ92523 772 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 PGM2Q96G03 612 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 MAGEB5Q9BZ81 275 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 LRRC4CQ9HCJ2 640 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 COX16Q9P0S2 106 aa23.12■■□□□ 1.29
CIRBP-208ENST00000586548 H3BRJ5 948 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 GOT1P17174 413 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 SCAPQ12770 1279 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 KYNUQ16719 465 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 C6orf118Q5T5N4 469 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 BEND5Q7L4P6 421 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 RNF139Q8WU17 664 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 USP29Q9HBJ7 922 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 WDR6Q9NNW5 1121 aaKnown RBP23.11■■□□□ 1.29
CIRBP-208ENST00000586548 BCCIPQ9P287 314 aaKnown RBP eCLIP23.11■■□□□ 1.29
CIRBP-208ENST00000586548 ADAM28Q9UKQ2 775 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 SCN5AQ14524 2016 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 TET1Q8NFU7 2136 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 F9P00740 461 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 CXCL10P02778 98 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 MAGEA4P43358 317 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 TCTN1Q2MV58 587 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 SLC39A12Q504Y0 691 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 CTU1Q7Z7A3 348 aaKnown RBP23.11■■□□□ 1.29
CIRBP-208ENST00000586548 NAT8LQ8N9F0 302 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 UHMK1Q8TAS1 419 aaKnown RBP23.11■■□□□ 1.29
CIRBP-208ENST00000586548 TLCD1Q96CP7 247 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 MRPL9Q9BYD2 267 aaKnown RBP23.11■■□□□ 1.29
CIRBP-208ENST00000586548 HIPK3Q9H422 1215 aa23.11■■□□□ 1.29
CIRBP-208ENST00000586548 BRCA2P51587 3418 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 A6NNZ2 444 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 SHOX2O60902 331 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-208ENST00000586548 ADRA1BP35368 520 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 ACTN2P35609 894 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 NFE2Q16621 373 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-208ENST00000586548 TUBB8Q3ZCM7 444 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 BSPRYQ5W0U4 402 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 NCBP2-AS2Q69YL0 99 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 SLC39A5Q6ZMH5 540 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 NPAS4Q8IUM7 802 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 CRIPAKQ8N1N5 446 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 ARFGAP2Q8N6H7 521 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 FUBP3Q96I24 572 aaKnown RBP eCLIP23.1■■□□□ 1.29
CIRBP-208ENST00000586548 TTC25Q96NG3 672 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 COLEC11Q9BWP8 271 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 SAYSD1Q9NPB0 183 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 PAK5Q9P286 719 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 FBXW11Q9UKB1 542 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 VWA8A3KMH1 1905 aa23.1■■□□□ 1.29
CIRBP-208ENST00000586548 RASGRF2O14827 1237 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 KCNN4O15554 427 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 ABHD2P08910 425 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 OR4Q2P0C623 313 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 AMPD1P23109 780 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 GRIK1P39086 918 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 GATMP50440 423 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 GBE1Q04446 702 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 DNAJC21Q5F1R6 531 aaKnown RBP23.09■■□□□ 1.29
CIRBP-208ENST00000586548 VARS2Q5ST30 1063 aaKnown RBP23.09■■□□□ 1.29
CIRBP-208ENST00000586548 CENPUQ71F23 418 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 BZW1Q7L1Q6 419 aaKnown RBP23.09■■□□□ 1.29
CIRBP-208ENST00000586548 SCLYQ96I15 445 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 ARHGEF4Q9NR80 690 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 DDIT4Q9NX09 232 aa23.09■■□□□ 1.29
CIRBP-208ENST00000586548 NOVA2Q9UNW9 492 aaKnown RBP23.09■■□□□ 1.29
CIRBP-208ENST00000586548 SF3B1O75533 1304 aaKnown RBP eCLIP23.09■■□□□ 1.291e-6■■■■■ 35.3
CIRBP-208ENST00000586548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-208ENST00000586548 DCDC2CA8MYV0 355 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 TNFRSF10BO14763 440 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 RBL1P28749 1068 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 ATN1P54259 1190 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-208ENST00000586548 SLC45A4Q5BKX6 768 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 MFSD5Q6N075 450 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 C4orf22Q6V702 233 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 ADAM32Q8TC27 787 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 EDEM1Q92611 657 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 QKIQ96PU8 341 aaKnown RBP eCLIP23.08■■□□□ 1.29
CIRBP-208ENST00000586548 CAPS2Q9BXY5 557 aa23.08■■□□□ 1.29
CIRBP-208ENST00000586548 TCEA3O75764 348 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 ALDH2P05091 517 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 CAPN2P17655 700 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 SLC5A3P53794 718 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 DMTNQ08495 405 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 SLC10A2Q12908 348 aaPredicted RBP23.08■■□□□ 1.28
CIRBP-208ENST00000586548 MRPL58Q14197 206 aaKnown RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms