RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 VGLL4Q14135 290 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 CCDC6Q16204 474 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 CXCL16Q9H2A7 254 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 ETNK2Q9NVF9 386 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 A0A087WZ62 844 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 SLC15A5A6NIM6 579 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 IL18RAPO95256 599 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 METTL18O95568 372 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 SNRPAP09012 282 aaKnown RBP19.12■□□□□ 0.65
CACTIN-204ENST00000585942 VDRP11473 427 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 OSBPP22059 807 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 ATXN1P54253 815 aaKnown RBP19.12■□□□□ 0.65
CACTIN-204ENST00000585942 CHI3L2Q15782 390 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 SMAD1Q15797 465 aaKnown RBP19.12■□□□□ 0.65
CACTIN-204ENST00000585942 ZCCHC23Q6ZST2 131 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 UNC5BQ8IZJ1 945 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 FAM172AQ8WUF8 416 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 PLEKHG4BQ96PX9 1271 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 LPIN3Q9BQK8 851 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 FDXACB1Q9BRP7 624 aaPredicted RBP19.12■□□□□ 0.65
CACTIN-204ENST00000585942 DMAP1Q9NPF5 467 aaPredicted RBP19.12■□□□□ 0.65
CACTIN-204ENST00000585942 PDGFCQ9NRA1 345 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 DNAH12Q6ZR08 3092 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 TRIP11Q15643 1979 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 SSC5DA1L4H1 1573 aa19.12■□□□□ 0.65
CACTIN-204ENST00000585942 HMX2A2RU54 273 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 TBX10O75333 385 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 USP2O75604 605 aaPredicted RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 KRT37O76014 449 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 ZBTB7AO95365 584 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 ENO1P06733 434 aaKnown RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 FAM47CQ5HY64 1035 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 GJC2Q5T442 439 aaPredicted RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 CCDC62Q6P9F0 684 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 UNC5AQ6ZN44 842 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 RBM12BQ8IXT5 1001 aaKnown RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 OPTNQ96CV9 577 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 PCDH18Q9HCL0 1135 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 MYO18AQ92614 2054 aaKnown RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 APOL1O14791 398 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 CAPN9O14815 690 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 HNRNPCL1O60812 293 aaKnown RBP19.11■□□□□ 0.65
CACTIN-204ENST00000585942 SNX30Q5VWJ9 437 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 GBP5Q96PP8 586 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 FAM49BQ9NUQ9 324 aa19.11■□□□□ 0.65
CACTIN-204ENST00000585942 H3BRJ5 948 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 RARBP10826 455 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 VHLP40337 213 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 MYBPC3Q14896 1274 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PPP1R26Q5T8A7 1209 aaPredicted RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 NETO2Q8NC67 525 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SNRNP25Q9BV90 132 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 MIS12Q9H081 205 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PNPLA8Q9NP80 782 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 RNF19AQ9NV58 838 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 DNAAF2Q9NVR5 837 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PIH1D1Q9NWS0 290 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SLC17A6Q9P2U8 582 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 BARX2Q9UMQ3 279 aaPredicted RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 B2RBV5 119 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 GAS2O43903 313 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 AMPD1P23109 780 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 MAGEA8P43361 318 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 GBE1Q04446 702 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 KDSRQ06136 332 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SLC10A2Q12908 348 aaPredicted RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SH3D19Q5HYK7 790 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 WDR78Q5VTH9 848 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PLPPR4Q7Z2D5 763 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 APOBEC3FQ8IUX4 373 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 E2F7Q96AV8 911 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 CLPTM1LQ96KA5 538 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 STOML1Q9UBI4 398 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PPARGC1AQ9UBK2 798 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 MCM3APO60318 1980 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SPAG6O75602 509 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 VTNP04004 478 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 SKIP12755 728 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 THOC5Q13769 683 aaKnown RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 MAP7D3Q8IWC1 876 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 NDUFAF2Q8N183 169 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 KLC2Q9H0B6 622 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 GBA2Q9HCG7 927 aaPredicted RBP19.1■□□□□ 0.65
CACTIN-204ENST00000585942 PHF24Q9UPV7 400 aa19.1■□□□□ 0.65
CACTIN-204ENST00000585942 GABBR2O75899 941 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 APOEP02649 317 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 AQP5P55064 265 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 ZNF534Q76KX8 674 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 ACOT1Q86TX2 421 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 NUDCD3Q8IVD9 361 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.09■□□□□ 0.65
CACTIN-204ENST00000585942 SCG3Q8WXD2 468 aaKnown RBP19.09■□□□□ 0.65
CACTIN-204ENST00000585942 PDZD7Q9H5P4 517 aa19.09■□□□□ 0.65
CACTIN-204ENST00000585942 POLR2AP24928 1970 aaKnown RBP19.09■□□□□ 0.65
CACTIN-204ENST00000585942 I3L4J1 428 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms