RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-205	ENST00000585535	FBXO21	O94952	628 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	SDHB	P21912	280 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	ID4	P47928	161 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	PXN	P49023	591 aa	Predicted RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	MFAP3	P55082	362 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	ARHGAP8	P85298	464 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	FOXK2	Q01167	660 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	CSRP2	Q16527	193 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	EXOC3L4	Q17RC7	722 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	EOGT	Q5NDL2	527 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	EMC10	Q5UCC4	262 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	GRAMD4	Q6IC98	578 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	MSANTD2	Q6P1R3	559 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	TMEM92	Q6UXU6	159 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	PRR23B	Q6ZRT6	265 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	CEP68	Q76N32	757 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	RSRC2	Q7L4I2	434 aa	Known RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	TRMT11	Q7Z4G4	463 aa	Known RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	C11orf74	Q86VG3	221 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	SIX6OS1	Q8N1H7	587 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	FAM160A2	Q8N612	972 aa	Predicted RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	ALLC	Q8N6M5	410 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	TSTD1	Q8NFU3	115 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	OLIG1	Q8TAK6	271 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	ZNF606	Q8WXB4	792 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	NDRG1	Q92597	394 aa	Known RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	AZIN2	Q96A70	460 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	HHIP	Q96QV1	700 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	HINFP	Q9BQA5	517 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	SLC2A11	Q9BYW1	496 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	NUP62CL	Q9H1M0	184 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	APEX2	Q9UBZ4	518 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	DACH1	Q9UI36	760 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	AGO1	Q9UL18	857 aa	Known RBP	11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	HCN2	Q9UL51	889 aa		11.97	□□□□□ -0.49
PTBP1-205	ENST00000585535	SLC12A8	A0AV02	714 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	SGK1	O00141	431 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	MED7	O43513	233 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	LATS1	O95835	1130 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	SLC9A1	P19634	815 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	BRD2	P25440	801 aa	Known RBP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	PON1	P27169	355 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	TIE1	P35590	1138 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	SEC13	P55735	322 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	ZNF445	P59923	1031 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	LMNB2	Q03252	620 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	MAN2A1	Q16706	1144 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	DPCR1	Q3MIW9	517 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	USP39	Q53GS9	565 aa	Known RBP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	FYB2	Q5VWT5	728 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	RBM43	Q6ZSC3	357 aa	Known RBP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	ERMP1	Q7Z2K6	904 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	TMEM110	Q86TL2	294 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	KBTBD6	Q86V97	674 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	DENND1C	Q8IV53	801 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	FAM114A1	Q8IWE2	563 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	CCDC33	Q8N5R6	958 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	TXNDC5	Q8NBS9	432 aa	Known RBP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	RNF139	Q8WU17	664 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	SHC3	Q92529	594 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	P2RY11	Q96G91	374 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	CRACR2A	Q9BSW2	395 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	SLC4A5	Q9BY07	1137 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	PARD6A	Q9NPB6	346 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	DNAJC17	Q9NVM6	304 aa	Known RBP	11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	RASAL2	Q9UJF2	1139 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	PCDHGA5	Q9Y5G8	931 aa		11.96	□□□□□ -0.49
PTBP1-205	ENST00000585535	BECN2	A8MW95	431 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	NEDD8-MDP1	E9PL57	170 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535		M0QYV0	167 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	NPC1	O15118	1278 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	TRIM24	O15164	1050 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	SART1	O43290	800 aa	Known RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	ALDH1A2	O94788	518 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	KLF8	O95600	359 aa	Predicted RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	IGLV3-27	P01718	113 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	LCP1	P13796	627 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	NTSR1	P30989	418 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	CORO1A	P31146	461 aa	Known RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	ACADSB	P45954	432 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	HARS2	P49590	506 aa	Known RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	DGKG	P49619	791 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	KDSR	Q06136	332 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	RING1	Q06587	406 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	5e-10	■■□□□ 11.5
PTBP1-205	ENST00000585535	E2F5	Q15329	346 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	LPAL2	Q16609	132 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	PLK5	Q496M5	336 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	ADGRF1	Q5T601	910 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	RNF43	Q68DV7	783 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	DPY19L2P1	Q6NXN4	242 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	TPGS1	Q6ZTW0	290 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	FMNL3	Q8IVF7	1028 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	RMDN1	Q96DB5	314 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	GABRG3	Q99928	467 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	NDST4	Q9H3R1	872 aa		11.95	□□□□□ -0.5
PTBP1-205	ENST00000585535	CD248	Q9HCU0	757 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms