RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MFSD1Q9H3U5 465 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 ASNSD1Q9NWL6 643 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 OSER1Q9NX31 292 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 DUSP12Q9UNI6 340 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PAXBP1Q9Y5B6 917 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 DOCK8Q8NF50 2099 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SYNJ2BP-COX16A0A087WUM0 186 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SSU72P8A0A1W2PR75 194 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 LEFTY2O00292 366 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 PLEKP08567 350 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 KRT3P12035 628 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 CYLC1P35663 651 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SCNN1AP37088 669 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 GABRB2P47870 512 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 HGSNATQ68CP4 663 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 CWF19L1Q69YN2 538 aaKnown RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 ALKBH5Q6P6C2 394 aaKnown RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 OLFML1Q6UWY5 402 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SLC26A9Q7LBE3 791 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 XYLT1Q86Y38 959 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SLC44A3Q8N4M1 653 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF276Q8N554 614 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 DCLK3Q9C098 648 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 MRPL47Q9HD33 250 aaKnown RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 PARVAQ9NVD7 372 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 DUS2Q9NX74 493 aaKnown RBP14.47□□□□□ -0.09
TRAF4-215ENST00000584944 RRN3Q9NYV6 651 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 COX16Q9P0S2 106 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 ARHGAP20Q9P2F6 1191 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 TBC1D14Q9P2M4 693 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SLC12A6Q9UHW9 1150 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 NAALADL1Q9UQQ1 740 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 CCL26Q9Y258 94 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 SCINQ9Y6U3 715 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 PATJQ8NI35 1801 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 FAM186AA6NE01 2351 aa14.47□□□□□ -0.09
TRAF4-215ENST00000584944 VPS13AQ96RL7 3174 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 MYO16Q9Y6X6 1858 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 DDX3XO00571 662 aaKnown RBP eCLIP14.46□□□□□ -0.092e-10■□□□□ 10.6
TRAF4-215ENST00000584944 NRG2O14511 850 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-215ENST00000584944 MDM4O15151 490 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 DAB1O75553 588 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 APOEP02649 317 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 PTMAP06454 111 aaKnown RBP14.46□□□□□ -0.09
TRAF4-215ENST00000584944 SLC2A3P11169 496 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 ABCB4P21439 1286 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 SDC4P31431 198 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 NBL1P41271 181 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 PGFP49763 221 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 NR1H3Q13133 447 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 NME3Q13232 169 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 MTF1Q14872 753 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 PDGFRLQ15198 375 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 BEND5Q7L4P6 421 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 UNC45BQ8IWX7 931 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 MCOLN2Q8IZK6 566 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 DEFB106AQ8N104 65 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 CTNNBL1Q8WYA6 563 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-215ENST00000584944 ATP2A3Q93084 1043 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 PLD4Q96BZ4 506 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 METTL5Q9NRN9 209 aaKnown RBP14.46□□□□□ -0.09
TRAF4-215ENST00000584944 TMEM51Q9NW97 253 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 DDIT4Q9NX09 232 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 MYO1AQ9UBC5 1043 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 SFMBT1Q9UHJ3 866 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF510Q9Y2H8 683 aa14.46□□□□□ -0.09
TRAF4-215ENST00000584944 HBS1LQ9Y450 684 aaKnown RBP14.46□□□□□ -0.09
TRAF4-215ENST00000584944 A0A087X0T9 212 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 PI15O43692 258 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 GABBR2O75899 941 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 OLFM2O95897 454 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 FAM228BP0C875 321 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 SRFP11831 508 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 AOC1P19801 751 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 NOS2P35228 1153 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 MATKP42679 507 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 SLC11A2P49281 568 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 SULT1E1P49888 294 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 TBX4P57082 545 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 AMPD2Q01433 879 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 GFPT1Q06210 699 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-215ENST00000584944 TAF5Q15542 800 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 SLC18A3Q16572 532 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 NUGGCQ68CJ6 796 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 VITQ6UXI7 678 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 MON1BQ7L1V2 547 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 TMTC1Q8IUR5 882 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 CPA6Q8N4T0 437 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 TC2NQ8N9U0 490 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 C3orf20Q8ND61 904 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 FLCNQ8NFG4 579 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 ADAM32Q8TC27 787 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 DQX1Q8TE96 717 aaKnown RBP14.45□□□□□ -0.1
TRAF4-215ENST00000584944 EXOC4Q96A65 974 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 BAG1Q99933 345 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-215ENST00000584944 KLF16Q9BXK1 252 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms