RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 WDCPQ9H6R7 721 aa10.67□□□□□ -0.7
RFFL-212ENST00000584655 EEF2KO00418 725 aaKnown RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 NPR3P17342 541 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 C10orf120Q5SQS8 335 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 FAM219BQ5XKK7 198 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 RFWD3Q6PCD5 774 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ARHGAP36Q6ZRI8 547 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 CLEC20AQ6ZU45 233 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 SPATA22Q8NHS9 363 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 EXT2Q93063 718 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 PRDM12Q9H4Q4 367 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ETNK1Q9HBU6 452 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 TPX2Q9ULW0 747 aaKnown RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 C2CD4BA6NLJ0 364 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 FAM155AB1AL88 458 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 IVLP07476 585 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 CKBP12277 381 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 AVPR1AP37288 418 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 PPP2R2AP63151 447 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 SLC10A2Q12908 348 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 ALS2CLQ60I27 953 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 C16orf46Q6P387 395 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 LCLAT1Q6UWP7 414 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 C4orf50Q6ZRC1 276 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZCCHC23Q6ZST2 131 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ATP11CQ8NB49 1132 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 SMOQ99835 787 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZBED2Q9BTP6 218 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 AVENQ9NQS1 362 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZDHHC18Q9NUE0 388 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 MFSD11O43934 449 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 METTL18O95568 372 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 CPP00450 1065 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 CYBAP13498 195 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 KRT4P19013 534 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZNF132P52740 706 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZNF143P52747 638 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 TSPY1Q01534 308 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 DPYSL3Q14195 570 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZNF449Q6P9G9 518 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 TAS1R1Q7RTX1 841 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 GSTCDQ8NEC7 633 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 OR6K2Q8NGY2 324 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 PPP1R14CQ8TAE6 165 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 CCT8L2Q96SF2 557 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 IQCGQ9H095 443 aaKnown RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
RFFL-212ENST00000584655 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 SRRDQ9UH36 339 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
RFFL-212ENST00000584655 FAM187AA6NFU0 413 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 TRMT10BQ6PF06 316 aaKnown RBP10.65□□□□□ -0.7
RFFL-212ENST00000584655 C16orf59Q7L2K0 433 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 OTOP3Q7RTS5 596 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 LRRC34Q8IZ02 419 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 KIF2BQ8N4N8 673 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 PLD5Q8N7P1 536 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 ANKRD52Q8NB46 1076 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 EXOC4Q96A65 974 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 CCDC77Q9BR77 488 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 AAASQ9NRG9 546 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-212ENST00000584655 NKIRAS1Q9NYS0 192 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
RFFL-212ENST00000584655 ATG2BQ96BY7 2078 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 PSMB4P28070 264 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 HSPA9P38646 679 aaKnown RBP10.65□□□□□ -0.7
RFFL-212ENST00000584655 CLDN10P78369 228 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 ANKRD20A8PQ5CZ79 823 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 FBXO48Q5FWF7 155 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 EFHC2Q5JST6 749 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-212ENST00000584655 KATNAL2Q8IYT4 538 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 RYBPQ8N488 228 aaPredicted RBP10.65□□□□□ -0.7
RFFL-212ENST00000584655 MECRQ9BV79 373 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 TMBIM4Q9HC24 238 aa10.65□□□□□ -0.7
RFFL-212ENST00000584655 ATP8B1O43520 1251 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 PSTPIP1O43586 416 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 MT-CYBP00156 380 aaPredicted RBP10.65□□□□□ -0.71
RFFL-212ENST00000584655 PRKCGP05129 697 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 POU5F1Q01860 360 aaKnown RBP10.65□□□□□ -0.71
RFFL-212ENST00000584655 SLC25A11Q02978 314 aaKnown RBP10.65□□□□□ -0.71
RFFL-212ENST00000584655 TLE2Q04725 743 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 POU6F1Q14863 301 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 PSMD5Q16401 504 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 CENPUQ71F23 418 aa10.65□□□□□ -0.71
RFFL-212ENST00000584655 PRPF39Q86UA1 669 aaKnown RBP10.65□□□□□ -0.71
RFFL-212ENST00000584655 WDR27A2RRH5 827 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms