RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 USP36Q9P275 1121 aaKnown RBP9.23□□□□□ -0.93
NUP85-223ENST00000583877 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
NUP85-223ENST00000583877 RAXQ9Y2V3 346 aa9.23□□□□□ -0.93
NUP85-223ENST00000583877 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
NUP85-223ENST00000583877 RAD54BQ9Y620 910 aa9.23□□□□□ -0.93
NUP85-223ENST00000583877 CLIC4Q9Y696 253 aa9.23□□□□□ -0.93
NUP85-223ENST00000583877 NAV2Q8IVL1 2488 aa9.23□□□□□ -0.93
NUP85-223ENST00000583877 COL6A6A6NMZ7 2263 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TDRD6O60522 2096 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 WASH3PC4AMC7 463 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 NPC1O15118 1278 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 EIF3DO15371 548 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP85-223ENST00000583877 AP1G2O75843 785 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 CISD3P0C7P0 127 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 NCAM1P13591 858 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 OXTRP30559 389 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 ATICP31939 592 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 HOXD13P35453 343 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 MATKP42679 507 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 GCGRP47871 477 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 DGKGP49619 791 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 CYP24A1Q07973 514 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 GOLGA8FQ08AF8 430 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 GOLGA8DPQ0D2H9 430 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TRPC3Q13507 836 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 STARD3Q14849 445 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 QPCTQ16769 361 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 FUT11Q495W5 492 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 DBX2Q6ZNG2 339 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TPGS1Q6ZTW0 290 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 PAQR9Q6ZVX9 377 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 ZCCHC9Q8N567 271 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 GLIS3Q8NEA6 775 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 SYAP1Q96A49 352 aaPredicted RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 TOE1Q96GM8 510 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 LRIG1Q96JA1 1093 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TNIP3Q96KP6 325 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 BBC3Q96PG8 261 aaPredicted RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 CDC6Q99741 560 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 VRTNQ9H8Y1 702 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 PRDM16Q9HAZ2 1276 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 IL21RQ9HBE5 538 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 CYLDQ9NQC7 956 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 ITM2CQ9NQX7 267 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TM7SF3Q9NS93 570 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 LSM7Q9UK45 103 aaKnown RBP9.22□□□□□ -0.93
NUP85-223ENST00000583877 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 PCDHGB2Q9Y5G2 931 aa9.22□□□□□ -0.93
NUP85-223ENST00000583877 ZNF462Q96JM2 2506 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 EIF4E1BA6NMX2 242 aaKnown RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 BCAT2O15382 392 aaPredicted RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 FLRT2O43155 660 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 CILPO75339 1184 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 TBX18O95935 607 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 IGLV3-19P01714 112 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 ATP5C1P36542 298 aaKnown RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 PGFP49763 221 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 TPMTP51580 245 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 CDH8P55286 799 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 MYL6P60660 151 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 SNRPFP62306 86 aaKnown RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 ENPP2Q13822 863 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 DCAF12L1Q5VU92 463 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 KLHDC10Q6PID8 442 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 EPM2AIP1Q7L775 607 aaPredicted RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 FUKQ8N0W3 1084 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 GALNT15Q8N3T1 639 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 ZMIZ2Q8NF64 920 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 ZNF507Q8TCN5 953 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 HPS3Q969F9 1004 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 CCDC127Q96BQ5 260 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 GPR174Q9BXC1 333 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 PANK2Q9BZ23 570 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 LRRC27Q9C0I9 530 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 MIR1-1HGQ9H1L0 117 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 TNMDQ9H2S6 317 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 SMYD3Q9H7B4 428 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 CSNK1G1Q9HCP0 422 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 AGPAT3Q9NRZ7 376 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 KRT82Q9NSB4 513 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 SLC27A6Q9Y2P4 619 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 STON1Q9Y6Q2 735 aa9.21□□□□□ -0.94
NUP85-223ENST00000583877 MORC2Q9Y6X9 1032 aaPredicted RBP9.21□□□□□ -0.94
NUP85-223ENST00000583877 A0A087WV48 116 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 A0A087X0B3 334 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 METTL12A8MUP2 240 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 KCNJ18B7U540 433 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 TGFB1I1O43294 461 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 BEST1O76090 585 aa9.2□□□□□ -0.94
NUP85-223ENST00000583877 ATXN1LP0C7T5 689 aaKnown RBP9.2□□□□□ -0.94
NUP85-223ENST00000583877 ACO1P21399 889 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms