RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CLIC5Q9NZA1 410 aa26.08■■□□□ 1.77
TSEN54-209ENST00000583454 PCDHGC3Q9UN70 934 aa26.08■■□□□ 1.77
TSEN54-209ENST00000583454 TLR5O60602 858 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 JAM2P57087 298 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 AMPD2Q01433 879 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 ADIGQ0VDE8 80 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 GAB4Q2WGN9 574 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 FILIP1LQ4L180 1135 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 PRR23CQ6ZRP0 262 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 BHLHA9Q7RTU4 235 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 NEK11Q8NG66 645 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 GAB3Q8WWW8 586 aa26.07■■□□□ 1.76
TSEN54-209ENST00000583454 PCMTD1Q96MG8 357 aaPredicted RBP26.07■■□□□ 1.76
TSEN54-209ENST00000583454 NAP1L5Q96NT1 182 aaPredicted RBP26.07■■□□□ 1.76
TSEN54-209ENST00000583454 ATG13O75143 517 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 IFNAR2P48551 515 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 RGS7P49802 495 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 NR1I3Q14994 352 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 ARHGAP18Q8N392 663 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 KIAA1958Q8N8K9 716 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 TTC16Q8NEE8 873 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 ZFRQ96KR1 1074 aaKnown RBP26.06■■□□□ 1.76
TSEN54-209ENST00000583454 RTKNQ9BST9 563 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 TSPY26PQ9H489 355 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 CNGB3Q9NQW8 809 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 NAGPAQ9UK23 515 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 CPQQ9Y646 472 aa26.06■■□□□ 1.76
TSEN54-209ENST00000583454 KMT2BQ9UMN6 2715 aaPredicted RBP26.05■■□□□ 1.76
TSEN54-209ENST00000583454 DCDC2BA2VCK2 349 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 GOLGA6L19H0YKK7 550 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 LEFTY2O00292 366 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 MBL2P11226 248 aaPredicted RBP26.05■■□□□ 1.76
TSEN54-209ENST00000583454 RARGP13631 454 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 FBXO43Q4G163 708 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 KLHDC10Q6PID8 442 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 CEP68Q76N32 757 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 SIX6OS1Q8N1H7 587 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 WDTC1Q8N5D0 677 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 CD101Q93033 1021 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 SLC4A5Q9BY07 1137 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 LHX5Q9H2C1 402 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 NLRC4Q9NPP4 1024 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 CYTH4Q9UIA0 394 aa26.05■■□□□ 1.76
TSEN54-209ENST00000583454 A0A1W2PQC6 194 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 TBX18O95935 607 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 CYP11B1P15538 503 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 FANCCQ00597 558 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 RPLP0P6Q8NHW5 317 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 NETO1Q8TDF5 533 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 NDRG1Q92597 394 aaKnown RBP26.04■■□□□ 1.76
TSEN54-209ENST00000583454 SMPD4Q9NXE4 827 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 SLC8A2Q9UPR5 921 aa26.04■■□□□ 1.76
TSEN54-209ENST00000583454 ANTXRLA6NF34 631 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 SLC30A4O14863 429 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 GDF9O60383 454 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 RPP40O75818 363 aaKnown RBP26.03■■□□□ 1.76
TSEN54-209ENST00000583454 SERPINC1P01008 464 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 RALAP11233 206 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 LCP1P13796 627 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 KRT9P35527 623 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 SOX5P35711 763 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 ATP5C1P36542 298 aaKnown RBP26.03■■□□□ 1.76
TSEN54-209ENST00000583454 OPRD1P41143 372 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 DAOAP59103 153 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 YWHAGP61981 247 aaKnown RBP eCLIP26.03■■□□□ 1.76
TSEN54-209ENST00000583454 TMEM110Q86TL2 294 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 KBTBD6Q86V97 674 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 DDX42Q86XP3 938 aaKnown RBP eCLIP26.03■■□□□ 1.76
TSEN54-209ENST00000583454 CAMKK1Q8N5S9 505 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 IRGQQ8WZA9 623 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 DDX1Q92499 740 aaKnown RBP26.03■■□□□ 1.76
TSEN54-209ENST00000583454 HHIPQ96QV1 700 aa26.03■■□□□ 1.76
TSEN54-209ENST00000583454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.02■■□□□ 1.76
TSEN54-209ENST00000583454 YJEFN3A6XGL0 299 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 E7ENQ6 273 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 FBXO21O94952 628 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 ACADSBP45954 432 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 ZNF445P59923 1031 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 SYT13Q7L8C5 426 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 TADA2BQ86TJ2 420 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 SPAG5Q96R06 1193 aa26.02■■□□□ 1.76
TSEN54-209ENST00000583454 CDK5RAP1Q96SZ6 601 aaKnown RBP26.02■■□□□ 1.76
TSEN54-209ENST00000583454 KLF16Q9BXK1 252 aaPredicted RBP26.02■■□□□ 1.76
TSEN54-209ENST00000583454 GFPT2O94808 682 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 EPN2O95208 641 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 CHRM1P11229 460 aaPredicted RBP26.01■■□□□ 1.75
TSEN54-209ENST00000583454 STAT1P42224 750 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 C10orf120Q5SQS8 335 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 CACNA2D4Q7Z3S7 1137 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 EPS8L1Q8TE68 723 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 NUP205Q92621 2012 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 LOXL4Q96JB6 756 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 NACA2Q9H009 215 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 CFAP97Q9P2B7 532 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 DNMT3LQ9UJW3 386 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 NUDT5Q9UKK9 219 aa26.01■■□□□ 1.75
TSEN54-209ENST00000583454 ABCA7Q8IZY2 2146 aa26■■□□□ 1.75
TSEN54-209ENST00000583454 PIK3R2O00459 728 aa26■■□□□ 1.75
TSEN54-209ENST00000583454 AXIN1O15169 862 aa26■■□□□ 1.75
TSEN54-209ENST00000583454 NFATC1O95644 943 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms