RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 USP36Q9P275 1121 aaKnown RBP17.02■□□□□ 0.32
SREBF1-221ENST00000583080 APC2O95996 2303 aa17.02■□□□□ 0.31
SREBF1-221ENST00000583080 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
SREBF1-221ENST00000583080 CUTAO60888 179 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 STC2O76061 302 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 KLKB1P03952 638 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 NCAM1P13591 858 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 AFMP43652 599 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 AP3M2P53677 418 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 MFAP3P55082 362 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 BNC1Q01954 994 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 STARD3Q14849 445 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 GEN1Q17RS7 908 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 ZACNQ401N2 412 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 C10orf120Q5SQS8 335 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 CCNI2Q6ZMN8 369 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-221ENST00000583080 DNASE2BQ8WZ79 361 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 MIR1-1HGQ9H1L0 117 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 MAGEF1Q9HAY2 307 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 DMAC2Q9NW81 257 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 FBXO10Q9UK96 956 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 PCOLCE2Q9UKZ9 415 aa17.01■□□□□ 0.31
SREBF1-221ENST00000583080 A0A1B0GTW7 788 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
SREBF1-221ENST00000583080 PENKP01210 267 aaPredicted RBP17■□□□□ 0.31
SREBF1-221ENST00000583080 P4HA1P13674 534 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 CKAP5Q14008 2032 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 SGSM1Q2NKQ1 1148 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 C1orf220Q5T0J3 134 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 DCAF12L1Q5VU92 463 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 FYB2Q5VWT5 728 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 KLHDC10Q6PID8 442 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 SCD5Q86SK9 330 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 UNC93AQ86WB7 457 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 KIAA0895Q8NCT3 520 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 MDM1Q8TC05 714 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 HNRNPABQ99729 332 aaKnown RBP17■□□□□ 0.31
SREBF1-221ENST00000583080 THAP10Q9P2Z0 257 aaPredicted RBP17■□□□□ 0.31
SREBF1-221ENST00000583080 DNMT3LQ9UJW3 386 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 NAGPAQ9UK23 515 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 FNDC3AQ9Y2H6 1198 aaKnown RBP17■□□□□ 0.31
SREBF1-221ENST00000583080 SLC27A6Q9Y2P4 619 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 CELSR3Q9NYQ7 3312 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 PTPRBP23467 1997 aa17■□□□□ 0.31
SREBF1-221ENST00000583080 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 YEATS4O95619 227 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 HLA-DRAP01903 254 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 PIK3CAP42336 1068 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 PLA2G4AP47712 749 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 TPMTP51580 245 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 KIF11P52732 1056 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 STK4Q13043 487 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 ENPP2Q13822 863 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 COL28A1Q2UY09 1125 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 METTL3Q86U44 580 aaKnown RBP16.99■□□□□ 0.31
SREBF1-221ENST00000583080 PDZD3Q86UT5 571 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
SREBF1-221ENST00000583080 ZDHHC5Q9C0B5 715 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 CCDC86Q9H6F5 360 aaKnown RBP16.99■□□□□ 0.31
SREBF1-221ENST00000583080 GAREM1Q9H706 876 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 APOBEC3GQ9HC16 384 aaKnown RBP16.99■□□□□ 0.31
SREBF1-221ENST00000583080 ITM2CQ9NQX7 267 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 CLEC4EQ9ULY5 219 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 PCDHA5Q9Y5H7 936 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 SLCO1B1Q9Y6L6 691 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 ACACAQ13085 2346 aa16.99■□□□□ 0.31
SREBF1-221ENST00000583080 LOC400499M0QZD8 3231 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 KLRC4O43908 158 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 CILPO75339 1184 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 HMBSP08397 361 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 PRKCHP24723 683 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 COPAP53621 1224 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 SOWAHCQ53LP3 525 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 GLRX5Q86SX6 157 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 TMPRSS6Q8IU80 811 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 BAHD1Q8TBE0 780 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 SETD7Q8WTS6 366 aaKnown RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 SORCS1Q8WY21 1168 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 TAF4BQ92750 862 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 CYFIP2Q96F07 1278 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 BACH2Q9BYV9 841 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 KCTD10Q9H3F6 313 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 TOR4AQ9NXH8 423 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 RASAL2Q9UJF2 1139 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 APOBEC2Q9Y235 224 aaKnown RBP16.98■□□□□ 0.31
SREBF1-221ENST00000583080 NFE2L3Q9Y4A8 694 aa16.98■□□□□ 0.31
SREBF1-221ENST00000583080 BCAT2O15382 392 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 NR3C1P04150 777 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 CORO1AP31146 461 aaKnown RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 EFEMP1Q12805 493 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 ZNF234Q14588 700 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 FOXD4L5Q5VV16 416 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms