RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 CASP1P29466 404 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 CD6P30203 668 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 SCAPQ12770 1279 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 GRIK2Q13002 908 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 ORC1Q13415 861 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 KLHDC10Q6PID8 442 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 Q6ZNB5 142 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 GPRIN1Q7Z2K8 1008 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 C12orf29Q8N999 325 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 GOLGA5Q8TBA6 731 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 BLZF1Q9H2G9 400 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 NMUR1Q9HB89 426 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 FAM49BQ9NUQ9 324 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 WSB2Q9NYS7 404 aaPredicted RBP14.29□□□□□ -0.12
SS18-222ENST00000582792 USP36Q9P275 1121 aaKnown RBP14.29□□□□□ -0.12
SS18-222ENST00000582792 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 FBXO10Q9UK96 956 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 NFE2L3Q9Y4A8 694 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 STON1Q9Y6Q2 735 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 A0A1B0GTW7 788 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 PVALEFA0A1B0GWK0 134 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 HHLA1C9JL84 531 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 PLA2G4AP47712 749 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 ZNF132P52740 706 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 ADAMTS20P59510 1910 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 STARD3Q14849 445 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 SGSM1Q2NKQ1 1148 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 FUT11Q495W5 492 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 CLEC20AQ6ZU45 233 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 GLRX5Q86SX6 157 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 PNPLA1Q8N8W4 532 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 BHMTQ93088 406 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 TOE1Q96GM8 510 aaKnown RBP14.28□□□□□ -0.12
SS18-222ENST00000582792 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 PNPLA8Q9NP80 782 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 ITM2CQ9NQX7 267 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.28□□□□□ -0.12
SS18-222ENST00000582792 DNMT3LQ9UJW3 386 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 HPSEQ9Y251 543 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 GPSM3Q9Y4H4 160 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
SS18-222ENST00000582792 CELSR3Q9NYQ7 3312 aa14.27□□□□□ -0.12
SS18-222ENST00000582792 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.12
SS18-222ENST00000582792 A0A1W2PQH9 124 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 MEI4A8MW99 385 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 NPC1O15118 1278 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 MDM4O15151 490 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 CBFA2T3O75081 653 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 NCAM1P13591 858 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 RARGP13631 454 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 ADORA2BP29275 332 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 ASPAP45381 313 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 DLG4P78352 724 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 ENPP2Q13822 863 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 ZACNQ401N2 412 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 CCNI2Q6ZMN8 369 aaPredicted RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 SLC9A9Q8IVB4 645 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 CADM4Q8NFZ8 388 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 TMEM174Q8WUU8 243 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 TAF4BQ92750 862 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 P2RY11Q96G91 374 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 MKRN2Q9H000 416 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 GDPD2Q9HCC8 539 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 PLK2Q9NYY3 685 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 PCOLCE2Q9UKZ9 415 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 APOBEC2Q9Y235 224 aaKnown RBP14.27□□□□□ -0.13
SS18-222ENST00000582792 PLXNB3Q9ULL4 1909 aa14.27□□□□□ -0.13
SS18-222ENST00000582792 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 STC2O76061 302 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 ASS1P00966 412 aaKnown RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 IL12RB1P42701 662 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 MFAP3P55082 362 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 CUL4BQ13620 913 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 FYB2Q5VWT5 728 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 SPOPLQ6IQ16 392 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 ZNF276Q8N554 614 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 ZCCHC9Q8N567 271 aaKnown RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 JAKMIP2Q96AA8 810 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 GPR174Q9BXC1 333 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 CCDC86Q9H6F5 360 aaKnown RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 THAP10Q9P2Z0 257 aaPredicted RBP14.26□□□□□ -0.13
SS18-222ENST00000582792 ZNF510Q9Y2H8 683 aa14.26□□□□□ -0.13
SS18-222ENST00000582792 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 KLKB1P03952 638 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 SLFN14P0C7P3 912 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 ZNF883P0CG24 379 aa14.25□□□□□ -0.13
SS18-222ENST00000582792 PFKFB1P16118 471 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms