RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ATXN1P54253 815 aaKnown RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 POU5F1BQ06416 359 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 DSC1Q08554 894 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 ASIC2Q16515 512 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 LILRA6Q6PI73 481 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 TSSK4Q6SA08 328 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 RAD9BQ6WBX8 426 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 APBB1IPQ7Z5R6 666 aaPredicted RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 KIAA1328Q86T90 577 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 RNF168Q8IYW5 571 aaPredicted RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 SECISBP2LQ93073 1101 aaKnown RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 CCDC127Q96BQ5 260 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 SAAL1Q96ER3 474 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 FNBP1Q96RU3 617 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 KXD1Q9BQD3 176 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 FAM213AQ9BRX8 229 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 MSTO1Q9BUK6 570 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 RHOBTB2Q9BYZ6 727 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 NHEJ1Q9H9Q4 299 aaPredicted RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.89□□□□□ -0.67
SS18-221ENST00000582448 ANKFY1Q9P2R3 1169 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 FAM8A1Q9UBU6 413 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 ADAM28Q9UKQ2 775 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 AGO2Q9UKV8 859 aaKnown RBP10.89□□□□□ -0.67
SS18-221ENST00000582448 CDH7Q9ULB5 785 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 USP18Q9UMW8 372 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 GIT1Q9Y2X7 761 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 USP27XA6NNY8 438 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 TISP43B9A030 160 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 TOM1L1O75674 476 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 NPTXRO95502 500 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 CELA3AP09093 270 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 UCHL3P15374 230 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 FERP16591 822 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 SLC9A1P19634 815 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 ANXA13P27216 316 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 ADSSP30520 456 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 AXLP30530 894 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 STAT1P42224 750 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 GCLMP48507 274 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 PRPF4BQ13523 1007 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 SURF1Q15526 300 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 LIN9Q5TKA1 542 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 KRT39Q6A163 491 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 CBWD2Q8IUF1 395 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 GIMAP7Q8NHV1 300 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 ITFG1Q8TB96 612 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 FGF13Q92913 245 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 FAM81BQ96LP2 452 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 TARS2Q9BW92 718 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 TSGA10Q9BZW7 698 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 GANQ9H2C0 597 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 NXF3Q9H4D5 531 aaKnown RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 TMEM8AQ9HCN3 771 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 PRMT7Q9NVM4 692 aaPredicted RBP10.88□□□□□ -0.67
SS18-221ENST00000582448 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 STYXL1Q9Y6J8 313 aa10.88□□□□□ -0.67
SS18-221ENST00000582448 GVINP1Q7Z2Y8 2422 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 SSU72P8A0A1W2PR75 194 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 ACKR2O00590 384 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 PMM2O15305 246 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 KRT86O43790 486 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 NOL4O94818 638 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 EFEMP2O95967 443 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 C8AP07357 584 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 DLATP10515 647 aaKnown RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 ARF4P18085 180 aaPredicted RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 AP3M2P53677 418 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 CYP24A1Q07973 514 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 MTF1Q14872 753 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 LPAL2Q16609 132 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 KYAT1Q16773 422 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 RTP2Q5QGT7 225 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 FAM171A1Q5VUB5 890 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 DNAJC14Q6Y2X3 702 aaPredicted RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 MTSS1LQ765P7 747 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 ING5Q8WYH8 240 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 CHP1Q99653 195 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 PAAF1Q9BRP4 392 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 NFKBIZQ9BYH8 718 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 STK33Q9BYT3 514 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 CEP44Q9C0F1 390 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms