RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 CUL2Q13617 745 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 WHAMMP3Q1A5X7 153 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SGSM1Q2NKQ1 1148 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 TDRD10Q5VZ19 366 aaKnown RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 LMBRD2Q68DH5 695 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SLC27A1Q6PCB7 646 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 FAM71AQ8IYT1 594 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 TTC39CQ8N584 583 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 CEP112Q8N8E3 955 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 TRPV1Q8NER1 839 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 RAET1EQ8TD07 263 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 U2AF1L4Q8WU68 220 aaKnown RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 CTNNBL1Q8WYA6 563 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SEMA4DQ92854 862 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SIGLEC10Q96LC7 697 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 ACAP3Q96P50 834 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 WDR24Q96S15 920 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 AGPAT1Q99943 283 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 TRIM6Q9C030 488 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 DNAI2Q9GZS0 605 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 DUSP15Q9H1R2 295 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 FAM124BQ9H5Z6 455 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 MINDY3Q9H8M7 445 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SEPT11Q9NVA2 429 aaKnown RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 SAGE1Q9NXZ1 904 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 AJAP1Q9UKB5 411 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-209ENST00000581733 DERAQ9Y315 318 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 JRKLQ9Y4A0 524 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 MRFAP1Q9Y605 127 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 MROH7Q68CQ1 1323 aa6.9□□□□□ -1.3
TVP23B-209ENST00000581733 A0A1B0GUA9 196 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TLDC2A0PJX2 215 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 FOXN3O00409 490 aaPredicted RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 XPOTO43592 962 aaKnown RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 RTN2O75298 545 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 GPR32O75388 356 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 VNN1O95497 513 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ASS1P00966 412 aaKnown RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 NAT2P11245 290 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 GZMAP12544 262 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ATICP31939 592 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TNFSF9P41273 254 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ADAM17P78536 824 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 MRPS6P82932 125 aaKnown RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TFAMQ00059 246 aaKnown RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 CDR2Q01850 454 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PUM1Q14671 1186 aaKnown RBP eCLIP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TMEM132DQ14C87 1099 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 GAB4Q2WGN9 574 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ZNF699Q32M78 642 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ZBTB41Q5SVQ8 909 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 EEF1DP3Q658K8 133 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TRIM72Q6ZMU5 477 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TRAPPC11Q7Z392 1133 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 RNF180Q86T96 592 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 SESTD1Q86VW0 696 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 RHOT2Q8IXI1 618 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 HACE1Q8IYU2 909 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 SYCE1Q8N0S2 351 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 CD99L2Q8TCZ2 262 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 DNAJB3Q8WWF6 145 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ZBTB10Q96DT7 871 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ZNF668Q96K58 619 aaPredicted RBP6.89□□□□□ -1.31
TVP23B-209ENST00000581733 MTMR12Q9C0I1 747 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 GPR88Q9GZN0 384 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PDCL3Q9H2J4 239 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 RNF186Q9NXI6 227 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 HDAC6Q9UBN7 1215 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 SUSD2Q9UGT4 822 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 CDC23Q9UJX2 597 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 ITGA11Q9UKX5 1188 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 GINS2Q9Y248 185 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 C2CD2Q9Y426 696 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 HYOU1Q9Y4L1 999 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PCDHB2Q9Y5E7 798 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TRPV2Q9Y5S1 764 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 TSC2P49815 1807 aa6.89□□□□□ -1.31
TVP23B-209ENST00000581733 PTPRJQ12913 1337 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
TVP23B-209ENST00000581733 MOCS3O95396 460 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 NPTXRO95502 500 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 PNMA6AP0CW24 399 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-209ENST00000581733 CXCL8P10145 99 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 TCP1P17987 556 aaKnown RBP6.88□□□□□ -1.31
TVP23B-209ENST00000581733 YY1P25490 414 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 OSTNP61366 133 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 TMEM62Q0P6H9 643 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-209ENST00000581733 AUHQ13825 339 aaKnown RBP6.88□□□□□ -1.31
TVP23B-209ENST00000581733 SNX17Q15036 470 aa6.88□□□□□ -1.31
TVP23B-209ENST00000581733 NR0B2Q15466 257 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms