RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 EPS8L1Q8TE68 723 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 SLC20A1Q8WUM9 679 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 AGO1Q9UL18 857 aaKnown RBP21.03■□□□□ 0.96
SS18-218ENST00000581021 STRIP2Q9ULQ0 834 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 NAALADL1Q9UQQ1 740 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 USP34Q70CQ2 3546 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 PIEZO1Q92508 2521 aa21.03■□□□□ 0.96
SS18-218ENST00000581021 K7EQS6 105 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 GFPT2O94808 682 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 PTMSP20962 102 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 DRD1P21728 446 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 ACADSBP45954 432 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 CSTF1Q05048 431 aaKnown RBP21.02■□□□□ 0.96
SS18-218ENST00000581021 KDSRQ06136 332 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 SYPL2Q5VXT5 272 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 TPGS1Q6ZTW0 290 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 DENND1CQ8IV53 801 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 SPEM1Q8N4L4 309 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 NAT16Q8N8M0 369 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 DQX1Q8TE96 717 aaKnown RBP21.02■□□□□ 0.96
SS18-218ENST00000581021 RNF139Q8WU17 664 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 PPP1R13BQ96KQ4 1090 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 IER2Q9BTL4 223 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 RTN4Q9NQC3 1192 aaKnown RBP21.02■□□□□ 0.96
SS18-218ENST00000581021 OLA1Q9NTK5 396 aaKnown RBP21.02■□□□□ 0.96
SS18-218ENST00000581021 MARK1Q9P0L2 795 aa21.02■□□□□ 0.96
SS18-218ENST00000581021 SMTNL1A8MU46 457 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 IGLV3-27P01718 113 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 CHRNB2P17787 502 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 CDH5P33151 784 aaPredicted RBP21.01■□□□□ 0.95
SS18-218ENST00000581021 KRT9P35527 623 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 NBL1P41271 181 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 BPIFB4P59827 614 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 PITX1P78337 314 aaPredicted RBP21.01■□□□□ 0.95
SS18-218ENST00000581021 GAD2Q05329 585 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 ANO4Q32M45 955 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 SYNPOQ8N3V7 929 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 ADAM32Q8TC27 787 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 NELL1Q92832 810 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 PLD4Q96BZ4 506 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 NAP1L5Q96NT1 182 aaPredicted RBP21.01■□□□□ 0.95
SS18-218ENST00000581021 FBXO4Q9UKT5 387 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 HBS1LQ9Y450 684 aaKnown RBP21.01■□□□□ 0.95
SS18-218ENST00000581021 R4GN57 208 aa21.01■□□□□ 0.95
SS18-218ENST00000581021 ATG2BQ96BY7 2078 aa21■□□□□ 0.95
SS18-218ENST00000581021 K7ESF4 209 aa21■□□□□ 0.95
SS18-218ENST00000581021 TULP3O75386 442 aa21■□□□□ 0.95
SS18-218ENST00000581021 MMEP08473 750 aa21■□□□□ 0.95
SS18-218ENST00000581021 NCAM1P13591 858 aa21■□□□□ 0.95
SS18-218ENST00000581021 SOX5P35711 763 aa21■□□□□ 0.95
SS18-218ENST00000581021 DMWDQ09019 674 aa21■□□□□ 0.95
SS18-218ENST00000581021 OLFML1Q6UWY5 402 aa21■□□□□ 0.95
SS18-218ENST00000581021 FAM183BPQ6ZVS7 135 aa21■□□□□ 0.95
SS18-218ENST00000581021 TAC4Q86UU9 113 aa21■□□□□ 0.95
SS18-218ENST00000581021 FAM217AQ8IXS0 508 aa21■□□□□ 0.95
SS18-218ENST00000581021 BHMTQ93088 406 aa21■□□□□ 0.95
SS18-218ENST00000581021 FAM149B1Q96BN6 582 aa21■□□□□ 0.95
SS18-218ENST00000581021 ZFHX2Q9C0A1 2572 aaPredicted RBP20.99■□□□□ 0.95
SS18-218ENST00000581021 NEDD8-MDP1E9PL57 170 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 GFRA2O00451 464 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 SART1O43290 800 aaKnown RBP20.99■□□□□ 0.95
SS18-218ENST00000581021 CACNG3O60359 315 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 TYRP14679 529 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 EIF2DP41214 584 aaKnown RBP20.99■□□□□ 0.95
SS18-218ENST00000581021 CCR3P51677 355 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 ZNF528Q3MIS6 628 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 FYB2Q5VWT5 728 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 NEK11Q8NG66 645 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 PCMTD1Q96MG8 357 aaPredicted RBP20.99■□□□□ 0.95
SS18-218ENST00000581021 PNKPQ96T60 521 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 BBS2Q9BXC9 721 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 DCLK3Q9C098 648 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 IRF2BPLQ9H1B7 796 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 ARHGEF4Q9NR80 690 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 PLK2Q9NYY3 685 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 HCN2Q9UL51 889 aa20.99■□□□□ 0.95
SS18-218ENST00000581021 A0A1B0GTH6 734 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 GRAP2O75791 330 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 KAT7O95251 611 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 PAPSS2O95340 614 aaPredicted RBP20.98■□□□□ 0.95
SS18-218ENST00000581021 PENKP01210 267 aaPredicted RBP20.98■□□□□ 0.95
SS18-218ENST00000581021 IGLV3-25P01717 112 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 CXCL12P48061 93 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 SEC13P55735 322 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 FMO1Q01740 532 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 C2CD6Q53TS8 623 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 BEND5Q7L4P6 421 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 RPLP0P6Q8NHW5 317 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 USP33Q8TEY7 942 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 GOLGA1Q92805 767 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 FCRL2Q96LA5 508 aaPredicted RBP20.98■□□□□ 0.95
SS18-218ENST00000581021 SLC2A13Q96QE2 648 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 ZDHHC4Q9NPG8 344 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 FANCMQ8IYD8 2048 aa20.98■□□□□ 0.95
SS18-218ENST00000581021 GPR179Q6PRD1 2367 aa20.97■□□□□ 0.95
SS18-218ENST00000581021 A0A0A0MRY4 1105 aa20.97■□□□□ 0.95
SS18-218ENST00000581021 CHURC1-FNTBB4DL54 471 aa20.97■□□□□ 0.95
SS18-218ENST00000581021 YWHAZP63104 245 aaKnown RBP20.97■□□□□ 0.95
SS18-218ENST00000581021 NOMO3P69849 1222 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms