RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 UTP15Q8TED0 518 aaKnown RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 RBM18Q96H35 190 aaKnown RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 AHCYL2Q96HN2 611 aaKnown RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 EPSTI1Q96J88 318 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 LRGUKQ96M69 825 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 CCDC43Q96MW1 224 aaKnown RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 COG8Q96MW5 612 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 SH3GL1Q99961 368 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 C7orf25Q9BPX7 421 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 VEZTQ9HBM0 779 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 CPNE5Q9HCH3 593 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 C1orf112Q9NSG2 853 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 INTS10Q9NVR2 710 aaKnown RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 MOSPD1Q9UJG1 213 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 LAMP5Q9UJQ1 280 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 BARX2Q9UMQ3 279 aaPredicted RBP4.35□□□□□ -1.71
SMG8-205ENST00000580798 GPR34Q9UPC5 381 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 DNM3Q9UQ16 869 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 PCDHGA2Q9Y5H1 932 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
SMG8-205ENST00000580798 CACNA1IQ9P0X4 2223 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 A8MVJ9 347 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 F8VZ95 297 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 KIAA0391O15091 583 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 PRKD3O94806 890 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 APBB3O95704 486 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 HSPA4LO95757 839 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 BMP15O95972 392 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 PRKCGP05129 697 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 HSPA1AP0DMV8 641 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 HSPA1BP0DMV9 641 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 WT1P19544 449 aaPredicted RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 GPD1P21695 349 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 PTGER1P34995 402 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 ATP8B2P98198 1209 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TNFAIP2Q03169 654 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 CDC16Q13042 620 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 IFIT5Q13325 482 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 SCARB2Q14108 478 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 INAQ16352 499 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 IMMTQ16891 758 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 TATDN1Q6P1N9 297 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 C11orf88Q6PI97 169 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 MFSD6Q6ZSS7 791 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 PEX5LQ8IYB4 626 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 NRSN1Q8IZ57 195 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 DCLK2Q8N568 766 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 FITM2Q8N6M3 262 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 GBP7Q8N8V2 638 aaPredicted RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 FAM184AQ8NB25 1140 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 ANKRD20A12PQ8NF67 263 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TBC1D15Q8TC07 691 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TEKT4Q8WW24 435 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 ZNF48Q96MX3 618 aaPredicted RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 NT5C1BQ96P26 610 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 PNKPQ96T60 521 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TREX2Q9BQ50 279 aaPredicted RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 TRIM7Q9C029 511 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 SLC7A5P2Q9GIP4 190 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 CLSTN2Q9H4D0 955 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 PSD3Q9NYI0 1048 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 HPCAL4Q9UM19 191 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 GPR52Q9Y2T5 361 aa4.34□□□□□ -1.71
SMG8-205ENST00000580798 NOSIPQ9Y314 301 aaKnown RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 CAB39Q9Y376 341 aaPredicted RBP4.34□□□□□ -1.71
SMG8-205ENST00000580798 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMG8-205ENST00000580798 AOX1Q06278 1338 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 MYBBP1AQ9BQG0 1328 aaKnown RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 FAM171A2A8MVW0 826 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 H7C0S8 307 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 KIF2AO00139 706 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 GABRDO14764 452 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 SPTLC2O15270 562 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 HOXC11O43248 304 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 PEX1O43933 1283 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 DAB1O75553 588 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 PALMO75781 387 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 STAM2O75886 525 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 TGDSO95455 350 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 STARD3NLO95772 234 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 PDHA1P08559 390 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 PARP1P09874 1014 aaKnown RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 AKR1B1P15121 316 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 HSPA6P17066 643 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 BTF3P20290 206 aaKnown RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 DDCP20711 480 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ATP5F1P24539 256 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 HADHAP40939 763 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 CD86P42081 329 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 TM4SF4P48230 202 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 CTCFP49711 727 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 TRAF1Q13077 416 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ARHGEF6Q15052 776 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ZSCAN26Q16670 478 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms