RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 AASDHQ4L235 1098 aaPredicted RBP22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 BHLHA9Q7RTU4 235 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 PPM1KQ8N3J5 372 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 C12orf50Q8NA57 414 aaPredicted RBP22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 HMGB4Q8WW32 186 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 ZNF510Q9Y2H8 683 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 STARD13Q9Y3M8 1113 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 PCDHB4Q9Y5E5 795 aa22.32■■□□□ 1.16
CSNK1D-215ENST00000580784 SLC12A8A0AV02 714 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 PRRT4C9JH25 899 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 CALCAP01258 141 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 CORO1AP31146 461 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 DGKGP49619 791 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 CREB5Q02930 508 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 ADIGQ0VDE8 80 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 CETN1Q12798 172 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 PAK1Q13153 545 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 PKDCCQ504Y2 493 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 EGFLAMQ63HQ2 1017 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 RRAGAQ7L523 313 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 TRMT11Q7Z4G4 463 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 TRIM59Q8IWR1 403 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 PGBD3Q8N328 593 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 FRMD1Q8N878 549 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 ACOX2Q99424 681 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 ZSWIM1Q9BR11 485 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 SRRTQ9BXP5 876 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 DCLK3Q9C098 648 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 BCCIPQ9P287 314 aaKnown RBP eCLIP22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 AGO1Q9UL18 857 aaKnown RBP22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 STRIP2Q9ULQ0 834 aa22.31■■□□□ 1.16
CSNK1D-215ENST00000580784 TCRBV21S2A2A0A5A6 115 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 BCLAF3A2AJT9 711 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 P4HA2O15460 535 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 PAEPP09466 180 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 NTSR1P30989 418 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 KCNH2Q12809 1159 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 PMS2CLQ68D20 193 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 LCLAT1Q6UWP7 414 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 C11orf74Q86VG3 221 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 DENND1CQ8IV53 801 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 ARHGEF19Q8IW93 802 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 EHBP1Q8NDI1 1231 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 IPO9Q96P70 1041 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 VPS45Q9NRW7 570 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 FBXO10Q9UK96 956 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 GON4LQ3T8J9 2241 aa22.3■■□□□ 1.16
CSNK1D-215ENST00000580784 YJEFN3A6XGL0 299 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 E7ENQ6 273 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 GABBR2O75899 941 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 GNA14O95837 355 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 SETSIPP0DME0 302 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 CHKAP35790 457 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 P2RY2P41231 377 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 CAMK4Q16566 473 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 FYB2Q5VWT5 728 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 BSPRYQ5W0U4 402 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 TCEAL6Q6IPX3 200 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 KCTD13Q8WZ19 329 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 EDEM1Q92611 657 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 TCEAL3Q969E4 200 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 PLXND1Q9Y4D7 1925 aa22.29■■□□□ 1.16
CSNK1D-215ENST00000580784 CNOT1A5YKK6 2376 aaKnown RBP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 CEP192Q8TEP8 1941 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 CAVIN2O95810 425 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 PENKP01210 267 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 LCP1P13796 627 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 HOXB2P14652 356 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 BRD2P25440 801 aaKnown RBP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 RGS7P49802 495 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 MARSP56192 900 aaKnown RBP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 CNGA2Q16280 664 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 PMF1Q6P1K2 205 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 CHPFQ8IZ52 775 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 SIX6OS1Q8N1H7 587 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 SLC35F5Q8WV83 523 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 ERLEC1Q96DZ1 483 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 KIAA1468Q9P260 1216 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 SFMBT1Q9UHJ3 866 aa22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.28■■□□□ 1.16
CSNK1D-215ENST00000580784 A0A1W2PQF6 199 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 PIK3R2O00459 728 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 MAP3K13O43283 966 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 AFPP02771 609 aaKnown RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 GABRG2P18507 467 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 DHPSP49366 369 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 UBE2HP62256 183 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 TRIP4Q15650 581 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 MAP7D1Q3KQU3 841 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 SDE2Q6IQ49 451 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 FMNL3Q8IVF7 1028 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 RBBP8NLQ8NC74 664 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 RNF139Q8WU17 664 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 KREMEN1Q96MU8 473 aa22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 OLA1Q9NTK5 396 aaKnown RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 MBD1Q9UIS9 605 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-215ENST00000580784 M0QYV0 167 aa22.26■■□□□ 1.15
CSNK1D-215ENST00000580784 LIMK1P53667 647 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms