RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 PMS1P54277 932 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 BST2Q10589 180 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 CETN1Q12798 172 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 EIF4HQ15056 248 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 SF3A2Q15428 464 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 MAP7D1Q3KQU3 841 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 SDE2Q6IQ49 451 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 LPCAT2Q7L5N7 544 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 TATDN2Q93075 761 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 CNGB3Q9NQW8 809 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 HESX1Q9UBX0 185 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 HBS1LQ9Y450 684 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 NFE2L3Q9Y4A8 694 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 KMT2BQ9UMN6 2715 aaPredicted RBP15.21■□□□□ 0.02
SMARCE1-216ENST00000580419 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 NEDD8-MDP1E9PL57 170 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 O00370 1275 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 ZBTB24O43167 697 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TIMM44O43615 452 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 KLKB1P03952 638 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 GBP1P32455 592 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 FMO5P49326 533 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 DGKGP49619 791 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 YWHAGP61981 247 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 SHC2P98077 582 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 GCNT1Q02742 428 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 CREB5Q02930 508 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 KDSRQ06136 332 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 LMAN2Q12907 356 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIP4Q15650 581 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 PPM1JQ5JR12 505 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 EMC10Q5UCC4 262 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TCERG1LQ5VWI1 586 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TTI2Q6NXR4 508 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 LCLAT1Q6UWP7 414 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 SFTPA1Q8IWL2 248 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 IRGQQ8WZA9 623 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 ARID3AQ99856 593 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 MARCH2Q9P0N8 246 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 TSPAN16Q9UKR8 245 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 HCN2Q9UL51 889 aa15.2■□□□□ 0.02
SMARCE1-216ENST00000580419 SCAMP3O14828 347 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 KHNYNO15037 678 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 DCLK1O15075 740 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 AP5Z1O43299 807 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 IRF1P10914 325 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 HOXB2P14652 356 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 TKTL1P51854 596 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 CNGA2Q16280 664 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 MPP7Q5T2T1 576 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 DAB2IPQ5VWQ8 1189 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 CYP2U1Q7Z449 544 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 SYT12Q8IV01 421 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 NAT16Q8N8M0 369 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 ZNF557Q8N988 423 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIML1Q8N9V2 468 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 CEP76Q8TAP6 659 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 SLC35F5Q8WV83 523 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 AZIN2Q96A70 460 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 HSFY1Q96LI6 401 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 TPSD1Q9BZJ3 242 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 ABCC13Q9NSE7 274 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 CNTN6Q9UQ52 1028 aa15.19■□□□□ 0.02
SMARCE1-216ENST00000580419 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 LNP1A1A4G5 178 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 UPK3BL1B0FP48 263 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 PRRT4C9JH25 899 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 UPK3BL2E5RIL1 263 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 CYBBP04839 570 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 GABRG2P18507 467 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 CSRP1P21291 193 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 RPL34P49207 117 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 MORC3Q14149 939 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 MSANTD2Q6P1R3 559 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 SLC23A3Q6PIS1 610 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 BEND5Q7L4P6 421 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIM59Q8IWR1 403 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 CHPFQ8IZ52 775 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 UCMAQ8WVF2 138 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 FAM81BQ96LP2 452 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 LRRC4Q9HBW1 653 aa15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 AGO1Q9UL18 857 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-216ENST00000580419 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 BCKDHBP21953 392 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 CORO1AP31146 461 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 HARS2P49590 506 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms