RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PRRT4C9JH25 899 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 CYP26A1O43174 497 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 TIMM44O43615 452 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 GREM1O60565 184 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 TOP3BO95985 862 aaKnown RBP18.82■□□□□ 0.6
MKS1-209ENST00000580127 F13A1P00488 732 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 CISD3P0C7P0 127 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 CD6P30203 668 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 INCA1Q0VD86 236 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 CCDC186Q7Z3E2 898 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 GRAMD1CQ8IYS0 662 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 ELMO3Q96BJ8 720 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 DUSP16Q9BY84 665 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 CACNA2D2Q9NY47 1150 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 NFE2L3Q9Y4A8 694 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 STON1Q9Y6Q2 735 aa18.82■□□□□ 0.6
MKS1-209ENST00000580127 MEI4A8MW99 385 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 KLRC4O43908 158 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 PGFP49763 221 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 KIF11P52732 1056 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 ARID5AQ03989 594 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 ENPEPQ07075 957 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 TRIP6Q15654 476 aaKnown RBP18.81■□□□□ 0.6
MKS1-209ENST00000580127 SPOPLQ6IQ16 392 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 TOGARAM2Q6ZUX3 1019 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 RSRC2Q7L4I2 434 aaKnown RBP18.81■□□□□ 0.6
MKS1-209ENST00000580127 SLC41A1Q8IVJ1 513 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 SPRYD3Q8NCJ5 442 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 KIAA0895Q8NCT3 520 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 CADM4Q8NFZ8 388 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 BHMTQ93088 406 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 SNX21Q969T3 373 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 FAXDC2Q96IV6 333 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 HEXIM2Q96MH2 286 aaKnown RBP18.81■□□□□ 0.6
MKS1-209ENST00000580127 UBXN6Q9BZV1 441 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 OSER1Q9NX31 292 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 PLK2Q9NYY3 685 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 HMGXB4Q9UGU5 601 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 FBXO10Q9UK96 956 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 HCN2Q9UL51 889 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 TRAF3IP3Q9Y228 551 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 CACNA1EQ15878 2313 aa18.81■□□□□ 0.6
MKS1-209ENST00000580127 CFAP47Q6ZTR5 3102 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 A0A1B0GTW7 788 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 SRRM3A6NNA2 597 aaPredicted RBP18.8■□□□□ 0.6
MKS1-209ENST00000580127 HHLA1C9JL84 531 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 STC2O76061 302 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 ACADMP11310 421 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 CD58P19256 250 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 CMA1P23946 247 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 PSMC2P35998 433 aaKnown RBP18.8■□□□□ 0.6
MKS1-209ENST00000580127 Q6ZNB5 142 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 SLC2A11Q9BYW1 496 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 NIF3L1Q9GZT8 377 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 NMUR1Q9HB89 426 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 ITM2CQ9NQX7 267 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 APOBEC2Q9Y235 224 aaKnown RBP18.8■□□□□ 0.6
MKS1-209ENST00000580127 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
MKS1-209ENST00000580127 FAM221BA6H8Z2 402 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 ACTN4O43707 911 aaKnown RBP18.79■□□□□ 0.6
MKS1-209ENST00000580127 STX10O60499 249 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 CD59P13987 128 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 NR2F2P24468 414 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 GTF2H1P32780 548 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 GCLMP48507 274 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 IL27RAQ6UWB1 636 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 GPRIN1Q7Z2K8 1008 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 FAM186BQ8IYM0 893 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 PRCCQ92733 491 aaPredicted RBP18.79■□□□□ 0.6
MKS1-209ENST00000580127 SIPA1Q96FS4 1042 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 CCDC34Q96HJ3 373 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 NUP58Q9BVL2 599 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 TMEM121BQ9BXQ6 578 aaPredicted RBP18.79■□□□□ 0.6
MKS1-209ENST00000580127 CD248Q9HCU0 757 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 FSCN3Q9NQT6 498 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 IGF2RP11717 2491 aa18.79■□□□□ 0.6
MKS1-209ENST00000580127 WASH3PC4AMC7 463 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 MDM4O15151 490 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 CILPO75339 1184 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 PENKP01210 267 aaPredicted RBP18.78■□□□□ 0.6
MKS1-209ENST00000580127 EFEMP1Q12805 493 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 ADAM9Q13443 819 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 EIF4HQ15056 248 aaKnown RBP18.78■□□□□ 0.6
MKS1-209ENST00000580127 NFIL3Q16649 462 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 TMPRSS6Q8IU80 811 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 CHCHD4Q8N4Q1 142 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 DDI1Q8WTU0 396 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 DNASE2BQ8WZ79 361 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 ERLEC1Q96DZ1 483 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 TOE1Q96GM8 510 aaKnown RBP18.78■□□□□ 0.6
MKS1-209ENST00000580127 WSB2Q9NYS7 404 aaPredicted RBP18.78■□□□□ 0.6
MKS1-209ENST00000580127 MARCH2Q9P0N8 246 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 THAP10Q9P2Z0 257 aaPredicted RBP18.78■□□□□ 0.6
MKS1-209ENST00000580127 RASAL2Q9UJF2 1139 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 KLK13Q9UKR3 277 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 USP3Q9Y6I4 520 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 FRYQ5TBA9 3013 aa18.78■□□□□ 0.6
MKS1-209ENST00000580127 SH3BP5O60239 455 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms