RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 CITED4Q96RK1 184 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 SRRTQ9BXP5 876 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 MRPL4Q9BYD3 311 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TSPAN10Q9H1Z9 355 aaPredicted RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 SLITRK6Q9H5Y7 841 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TASP1Q9H6P5 420 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CYP4F11Q9HBI6 524 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 OLFML3Q9NRN5 406 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 SLC38A7Q9NVC3 462 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ZNF446Q9NWS9 450 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 IFNKQ9P0W0 207 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ANKMY1Q9P2S6 941 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 NXF1Q9UBU9 619 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 IL17BQ9UHF5 180 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 MAN1B1Q9UKM7 699 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PCOLCE2Q9UKZ9 415 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PCNX2A6NKB5 2137 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PTPRDP23468 1912 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 SCN1AP35498 2009 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 A0A0B4J269 797 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TRIM49BA6NDI0 452 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CASTOR2A6NHX0 329 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 LACTBL1A8MY62 500 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PATE3B3GLJ2 98 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PPEF2O14830 753 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 HNRNPDLO14979 420 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 CLDN3O15551 220 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 NRDCO43847 1150 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 SLC28A2O43868 658 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CBFA2T3O75081 653 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ZNF217O75362 1048 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TOM1L1O75674 476 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 RHOBTB3O94955 611 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ZRANB2O95218 330 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDH19-204ENST00000579658 PIGRP01833 764 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ADRB2P07550 413 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PFKLP17858 780 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PRCPP42785 496 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CASP4P49662 377 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PDE6CP51160 858 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CDR1P51861 262 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 EPHA4P54764 986 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TPM4P67936 248 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PTK2Q05397 1052 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 MCL1Q07820 350 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 NAB2Q15742 525 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 DCAF4L1Q3SXM0 396 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 COLEC12Q5KU26 742 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 WDR45BQ5MNZ6 344 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 CC2D1AQ6P1N0 951 aaPredicted RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 CD300LGQ6UXG3 332 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ALKAL1Q6UXT8 129 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 WDR75Q8IWA0 830 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 REXO1L1PQ8IX06 675 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ST13P5Q8NFI4 369 aaPredicted RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 BEST2Q8NFU1 509 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 RPLP0P6Q8NHW5 317 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 SPATA20Q8TB22 786 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 PLEKHO2Q8TD55 490 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 FOXJ1Q92949 421 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 TCEAL4Q96EI5 215 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 B3GALT6Q96L58 329 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ACCSQ96QU6 501 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 GTPBP2Q9BX10 602 aaKnown RBP3.61□□□□□ -1.83
CDH19-204ENST00000579658 UBXN6Q9BZV1 441 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 KCTD10Q9H3F6 313 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 ST6GALNAC4Q9H4F1 302 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 EXOC1Q9NV70 894 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 C2orf42Q9NWW7 574 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDH19-204ENST00000579658 FHOD1Q9Y613 1164 aa3.61□□□□□ -1.83
CDH19-204ENST00000579658 VPS13AQ96RL7 3174 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SMIM28A0A1B0GU29 152 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 OR6C75A6NL08 312 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 EFCAB8A8MWE9 144 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 I3L4J1 428 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 CBFA2T2O43439 604 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TNFSF14O43557 240 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DFNA5O60443 496 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 EGFP01133 1207 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TPM1P09493 284 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MCF2P10911 925 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 RPL9P32969 192 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 EIF2DP41214 584 aaKnown RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 GRM5P41594 1212 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ALDH1A3P47895 512 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SOX9P48436 509 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 PXNP49023 591 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 CYP2J2P51589 502 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 STX17P56962 302 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 MYL5Q02045 173 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TWF1Q12792 350 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 SMARCB1Q12824 385 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 TBX2Q13207 712 aaPredicted RBP3.6□□□□□ -1.83
CDH19-204ENST00000579658 E2F5Q15329 346 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 ERCC6LQ2NKX8 1250 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 KRTAP21-3Q3LHN1 58 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 C4orf48Q5BLP8 95 aa3.6□□□□□ -1.83
CDH19-204ENST00000579658 DMRTA1Q5VZB9 504 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms