RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 NCAPHQ15003 741 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 BHLHA9Q7RTU4 235 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 ALYREFQ86V81 257 aaKnown RBP18.27■□□□□ 0.52
ITGB4-205ENST00000579211 MAML2Q8IZL2 1156 aaPredicted RBP18.27■□□□□ 0.52
ITGB4-205ENST00000579211 RPLP0P6Q8NHW5 317 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.52
ITGB4-205ENST00000579211 PHOX2BQ99453 314 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 SLC4A5Q9BY07 1137 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 LHX5Q9H2C1 402 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 DAAM1Q9Y4D1 1078 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 R4GN57 208 aa18.27■□□□□ 0.52
ITGB4-205ENST00000579211 RALGAPA1Q6GYQ0 2036 aa18.27■□□□□ 0.51
ITGB4-205ENST00000579211 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 GABBR2O75899 941 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 KAT7O95251 611 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 TYRP14679 529 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 CYP11B1P15538 503 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 ZNF18P17022 549 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 NBL1P41271 181 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 GAS6Q14393 721 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 C2orf27AQ580R0 203 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 TAF3Q5VWG9 929 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 OR6B2Q6IFH4 312 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 DPY19L2P1Q6NXN4 242 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 TMEM110Q86TL2 294 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 DHX40Q8IX18 779 aaKnown RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 TMEM35BQ8NCS4 154 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 C1orf131Q8NDD1 294 aaKnown RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 BHMTQ93088 406 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 NKD2Q969F2 451 aaPredicted RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 NAA15Q9BXJ9 866 aaKnown RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 FAM126AQ9BYI3 521 aaPredicted RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 CYTH4Q9UIA0 394 aa18.26■□□□□ 0.51
ITGB4-205ENST00000579211 AGO1Q9UL18 857 aaKnown RBP18.26■□□□□ 0.51
ITGB4-205ENST00000579211 LRRC10BA6NIK2 292 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 F8VZ95 297 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 HOXC11O43248 304 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-205ENST00000579211 GREM1O60565 184 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 GFPT2O94808 682 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 STAT1P42224 750 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 GRIA2P42262 883 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 RPL34P49207 117 aaKnown RBP18.25■□□□□ 0.51
ITGB4-205ENST00000579211 TBX4P57082 545 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 YWHAZP63104 245 aaKnown RBP18.25■□□□□ 0.51
ITGB4-205ENST00000579211 EFHC1Q5JVL4 640 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 GRAMD4Q6IC98 578 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 Q6ZNB5 142 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 CACNA2D4Q7Z3S7 1137 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 C12orf40Q86WS4 652 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 UNC45BQ8IWX7 931 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 MSANTD4Q8NCY6 345 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 DDI1Q8WTU0 396 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 ACDQ96AP0 544 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 GANQ9H2C0 597 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 DNAJC17Q9NVM6 304 aaKnown RBP18.25■□□□□ 0.51
ITGB4-205ENST00000579211 ZSCAN32Q9NX65 697 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 NAALADL1Q9UQQ1 740 aa18.25■□□□□ 0.51
ITGB4-205ENST00000579211 EML5Q05BV3 1969 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 GOLGA6L19H0YKK7 550 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 PAPSS1O43252 624 aaPredicted RBP18.24■□□□□ 0.51
ITGB4-205ENST00000579211 MSI1O43347 362 aaKnown RBP18.24■□□□□ 0.51
ITGB4-205ENST00000579211 TULP3O75386 442 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 SERPINC1P01008 464 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 KLKB1P03952 638 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 MRE11P49959 708 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 TRIP4Q15650 581 aaPredicted RBP18.24■□□□□ 0.51
ITGB4-205ENST00000579211 GAB4Q2WGN9 574 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
ITGB4-205ENST00000579211 MSANTD2Q6P1R3 559 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 WDTC1Q8N5D0 677 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 SERPINB11Q96P15 392 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 SEMA4AQ9H3S1 761 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 POPDC2Q9HBU9 364 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 PLK2Q9NYY3 685 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 PCDHGA2Q9Y5H1 932 aa18.24■□□□□ 0.51
ITGB4-205ENST00000579211 SPAG17Q6Q759 2223 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 ZFHX2Q9C0A1 2572 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-205ENST00000579211 CHURC1-FNTBB4DL54 471 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 K7EQS6 105 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 TIE1P35590 1138 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 SOX5P35711 763 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 TNFRSF4P43489 277 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 SLC11A2P49281 568 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 TOGARAM2Q6ZUX3 1019 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 ERICH1Q86X53 443 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 ERGIC2Q96RQ1 377 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 CPXM1Q96SM3 734 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 MARK1Q9P0L2 795 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 SIK3Q9Y2K2 1263 aa18.23■□□□□ 0.51
ITGB4-205ENST00000579211 CAVIN2O95810 425 aa18.22■□□□□ 0.51
ITGB4-205ENST00000579211 GBP1P32455 592 aa18.22■□□□□ 0.51
ITGB4-205ENST00000579211 DGKGP49619 791 aa18.22■□□□□ 0.51
ITGB4-205ENST00000579211 MRPS21P82921 87 aaKnown RBP18.22■□□□□ 0.51
ITGB4-205ENST00000579211 ARID5AQ03989 594 aa18.22■□□□□ 0.51
ITGB4-205ENST00000579211 MPPE1Q53F39 396 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms