RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 LHX5Q9H2C1 402 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 POLR1BQ9H9Y6 1135 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 MAGEC2Q9UBF1 373 aaPredicted RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 CHORDC1Q9UHD1 332 aaPredicted RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 CLEC4EQ9ULY5 219 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 DERAQ9Y315 318 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 A0A1W2PR77 199 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 GABRDO14764 452 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 SIGLEC6O43699 453 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 ITGB3P05106 788 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 OR52Z1P0C646 297 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 PLCG1P19174 1290 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 NOP14P78316 857 aaKnown RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 FOXK1P85037 733 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 ILKQ13418 452 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 SOWAHAQ2M3V2 549 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 TMEM215Q68D42 235 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 CRELD2Q6UXH1 353 aaPredicted RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 C1orf127Q8N9H9 656 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 PCED1BQ96HM7 432 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 GZF1Q9H116 711 aaPredicted RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 PCED1AQ9H1Q7 454 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 C2CD2Q9Y426 696 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
GGA3-206ENST00000578773 NF1P21359 2839 aa11.73□□□□□ -0.53
GGA3-206ENST00000578773 DNHD1Q96M86 4753 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 CLDN5O00501 218 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 HUS1O60921 280 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 TBX18O95935 607 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 ITGB2P05107 769 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 EPHX1P07099 455 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 MFAP3P55082 362 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 CLCA4Q14CN2 919 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 CD302Q8IX05 232 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 DIS3L2Q8IYB7 885 aaKnown RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 SCAMP5Q8TAC9 235 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
GGA3-206ENST00000578773 ZNF560Q96MR9 790 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 SERGEFQ9UGK8 458 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 FBXO10Q9UK96 956 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
GGA3-206ENST00000578773 ADGRG4Q8IZF6 3080 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 A0A1B0GVM2 712 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 FAM47DPA6NHR8 397 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 OPA1O60313 960 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 DFNA5O60443 496 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 SYNCRIPO60506 623 aaKnown RBP11.71□□□□□ -0.53
GGA3-206ENST00000578773 PIGRP01833 764 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 RNF224P0DH78 156 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 MUTP22033 750 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 ANXA13P27216 316 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 CDH8P55286 799 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.53
GGA3-206ENST00000578773 AAMPQ13685 434 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 KCNJ12Q14500 433 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 TGIF1Q15583 401 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 KIAA0895LQ68EN5 471 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 FAM26EQ8N5C1 309 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 FBXO32Q969P5 355 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 LIN37Q96GY3 246 aaPredicted RBP11.71□□□□□ -0.53
GGA3-206ENST00000578773 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
GGA3-206ENST00000578773 ZNF518BQ9C0D4 1074 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 MTG2Q9H4K7 406 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
GGA3-206ENST00000578773 SIX4Q9UIU6 781 aa11.71□□□□□ -0.53
GGA3-206ENST00000578773 SDK2Q58EX2 2172 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 MDM4O15151 490 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 WT1P19544 449 aaPredicted RBP11.7□□□□□ -0.54
GGA3-206ENST00000578773 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 BCAT1P54687 386 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 NXPH1P58417 271 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 RPS14P62263 151 aaKnown RBP11.7□□□□□ -0.54
GGA3-206ENST00000578773 CYP4F2P78329 520 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 HECTD3Q5T447 861 aa11.7□□□□□ -0.54
GGA3-206ENST00000578773 TDRD10Q5VZ19 366 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms