RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TNFAIP8L3Q5GJ75 292 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 SLC7A14Q8TBB6 771 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 PRDM16Q9HAZ2 1276 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 SAGE1Q9NXZ1 904 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 COL6A1P12109 1028 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 GOT1P17174 413 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 RBL1P28749 1068 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 NRLP54845 237 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 IFI35P80217 286 aaPredicted RBP28.74■■■□□ 2.19
LIMD2-203ENST00000578067 YWHAHQ04917 246 aaPredicted RBP28.74■■■□□ 2.19
LIMD2-203ENST00000578067 XRCC4Q13426 336 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 HIF1AQ16665 826 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 IRGQQ8WZA9 623 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 SLC9A7Q96T83 725 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 CCDC77Q9BR77 488 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 PIGVQ9NUD9 493 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 TBC1D13Q9NVG8 400 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 TMEM161AQ9NX61 479 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 GOLGA8MH3BSY2 632 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 TMEM189-UBE2V1I3L0A0 370 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 DNM1LO00429 736 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 ARL4CP56559 192 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 BASP1P80723 227 aaKnown RBP28.73■■■□□ 2.19
LIMD2-203ENST00000578067 GBE1Q04446 702 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 STAT4Q14765 748 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 BHLHA9Q7RTU4 235 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 CDKL3Q8IVW4 592 aaPredicted RBP28.73■■■□□ 2.19
LIMD2-203ENST00000578067 FAM126BQ8IXS8 530 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 TAB3Q8N5C8 712 aaPredicted RBP28.73■■■□□ 2.19
LIMD2-203ENST00000578067 RRN3Q9NYV6 651 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 PAK5Q9P286 719 aa28.73■■■□□ 2.19
LIMD2-203ENST00000578067 MAP3K6O95382 1288 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 NCAM1P13591 858 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 AMPD1P23109 780 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 RNASELQ05823 741 aaKnown RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 PDIA2Q13087 525 aaKnown RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 PM20D1Q6GTS8 502 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 PNPLA8Q9NP80 782 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 NBNO60934 754 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 IVLP07476 585 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 OR1G1P47890 313 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 AIF1P55008 147 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 SLC10A2Q12908 348 aaPredicted RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 NCBP2-AS2Q69YL0 99 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 ZBED8Q8IZ13 594 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 SCML4Q8N228 414 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 PGAP3Q96FM1 320 aaPredicted RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 FAM193BQ96PV7 902 aaPredicted RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 UNC93B1Q9H1C4 597 aa28.72■■■□□ 2.19
LIMD2-203ENST00000578067 CNOT10Q9H9A5 744 aaKnown RBP28.72■■■□□ 2.19
LIMD2-203ENST00000578067 A0A087WUV0 522 aaPredicted RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 H3BRJ5 948 aa28.71■■■□□ 2.19
LIMD2-203ENST00000578067 FASTKD3Q14CZ7 662 aaKnown RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 ZSCAN26Q16670 478 aa28.71■■■□□ 2.19
LIMD2-203ENST00000578067 EFHC2Q5JST6 749 aa28.71■■■□□ 2.19
LIMD2-203ENST00000578067 CTU1Q7Z7A3 348 aaKnown RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 ELAC1Q9H777 363 aaKnown RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 TMPRSS4Q9NRS4 437 aa28.71■■■□□ 2.19
LIMD2-203ENST00000578067 XPO7Q9UIA9 1087 aaKnown RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.71■■■□□ 2.19
LIMD2-203ENST00000578067 HTRA3P83110 453 aa28.7■■■□□ 2.19
LIMD2-203ENST00000578067 GAD2Q05329 585 aa28.7■■■□□ 2.19
LIMD2-203ENST00000578067 RNF139Q8WU17 664 aa28.7■■■□□ 2.19
LIMD2-203ENST00000578067 NTAN1Q96AB6 310 aa28.7■■■□□ 2.19
LIMD2-203ENST00000578067 TCRBV7S3A2A0A539 114 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 ENPP3O14638 875 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 TMEM63AO94886 807 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 LSP1P33241 339 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 ADRA1BP35368 520 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 GPNMBQ14956 572 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 SLC45A4Q5BKX6 768 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 HP1BP3Q5SSJ5 553 aaPredicted RBP28.7■■■□□ 2.18
LIMD2-203ENST00000578067 C4orf50Q6ZRC1 276 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 SPATA2LQ8IUW3 424 aaPredicted RBP28.7■■■□□ 2.18
LIMD2-203ENST00000578067 DBF4BQ8NFT6 615 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 ADAM32Q8TC27 787 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 WDR6Q9NNW5 1121 aaKnown RBP28.7■■■□□ 2.18
LIMD2-203ENST00000578067 ARHGEF4Q9NR80 690 aa28.7■■■□□ 2.18
LIMD2-203ENST00000578067 PLEKHG4Q58EX7 1191 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 FNBP1LQ5T0N5 605 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 ETNK2Q9NVF9 386 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 DTLQ9NZJ0 730 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 DNAJB4Q9UDY4 337 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 F9P00740 461 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 ATP5DP30049 168 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 MMP13P45452 471 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 BZW1Q7L1Q6 419 aaKnown RBP28.69■■■□□ 2.18
LIMD2-203ENST00000578067 FBXW11Q9UKB1 542 aa28.69■■■□□ 2.18
LIMD2-203ENST00000578067 PRG3Q9Y2Y8 225 aaPredicted RBP28.69■■■□□ 2.18
LIMD2-203ENST00000578067 E7ESA3 106 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 TRAPPC3O43617 180 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 OAZ2O95190 189 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 SCAPQ12770 1279 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 KCNJ11Q14654 390 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 KCNT2Q6UVM3 1135 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 C4orf22Q6V702 233 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 CCDC13Q8IYE1 715 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 EDEM1Q92611 657 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 QKIQ96PU8 341 aaKnown RBP eCLIP28.68■■■□□ 2.18
LIMD2-203ENST00000578067 DDIT4Q9NX09 232 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms