RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PNPLA1Q8N8W4 532 aa12.66□□□□□ -0.38
PRPF8-215ENST00000576958 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
PRPF8-215ENST00000576958 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
PRPF8-215ENST00000576958 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
PRPF8-215ENST00000576958 MKRN2Q9H000 416 aaKnown RBP12.66□□□□□ -0.38
PRPF8-215ENST00000576958 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
PRPF8-215ENST00000576958 MARK1Q9P0L2 795 aa12.66□□□□□ -0.38
PRPF8-215ENST00000576958 STARD13Q9Y3M8 1113 aa12.66□□□□□ -0.38
PRPF8-215ENST00000576958 TAF4O00268 1085 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 HLA-EP13747 358 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 PRKCHP24723 683 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 CORO1AP31146 461 aaKnown RBP12.65□□□□□ -0.38
PRPF8-215ENST00000576958 SGSHP51688 502 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 AP3M2P53677 418 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 MFAP3P55082 362 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 BNC1Q01954 994 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 DPYDQ12882 1025 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 ZNF366Q8N895 744 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 SLC4A11Q8NBS3 891 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 GOLGA5Q8TBA6 731 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 NIF3L1Q9GZT8 377 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 FBXO44Q9H4M3 255 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 FBXO10Q9UK96 956 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 AGO1Q9UL18 857 aaKnown RBP12.65□□□□□ -0.38
PRPF8-215ENST00000576958 TRAF3IP3Q9Y228 551 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
PRPF8-215ENST00000576958 MUC22E2RYF6 1773 aaPredicted RBP12.65□□□□□ -0.38
PRPF8-215ENST00000576958 SRRM3A6NNA2 597 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 AP5Z1O43299 807 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 SH3BP5O60239 455 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 TSPAN3O60637 253 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 GABBR2O75899 941 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 PENKP01210 267 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 SERPINF2P08697 491 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 RAD23BP54727 409 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 LMAN2Q12907 356 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 DENND1CQ8IV53 801 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 FAM186BQ8IYM0 893 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
PRPF8-215ENST00000576958 DUSP16Q9BY84 665 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 DNMT3LQ9UJW3 386 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 SLC6A14Q9UN76 642 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 USP3Q9Y6I4 520 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
PRPF8-215ENST00000576958 PLXNB3Q9ULL4 1909 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PIK3R2O00459 728 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 ARHGAP33O14559 1287 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 IKBKBO14920 756 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 GJB3O75712 270 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 P4HA1P13674 534 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CMA1P23946 247 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PLA2G4AP47712 749 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 COPAP53621 1224 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 LAYNQ6UX15 382 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CCDC186Q7Z3E2 898 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 FAM124AQ86V42 546 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PIGZQ86VD9 579 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 RGL4Q8IZJ4 473 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 ZCCHC9Q8N567 271 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 WFDC5Q8TCV5 224 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 ZCCHC14Q8WYQ9 949 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 TAF4BQ92750 862 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 TOE1Q96GM8 510 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PIWIL1Q96J94 861 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 HEXIM2Q96MH2 286 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 GPR174Q9BXC1 333 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 MTG2Q9H4K7 406 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CISHQ9NSE2 258 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
PRPF8-215ENST00000576958 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 LOC400499M0QZD8 3231 aa12.63□□□□□ -0.39
PRPF8-215ENST00000576958 CKAP5Q14008 2032 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 SLC12A8A0AV02 714 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 MSI1O43347 362 aaKnown RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 SYKP43405 635 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 NUMBP49757 651 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 GRIK2Q13002 908 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 ADAM9Q13443 819 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 ZNF234Q14588 700 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms