RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 STAT6P42226 847 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 TUFMP49411 452 aaKnown RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 BFSP1Q12934 665 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 CDK5R2Q13319 367 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 MAP7Q14244 749 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PON2Q15165 354 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 DDR2Q16832 855 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 SV2CQ496J9 727 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 ARHGAP15Q53QZ3 475 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 NAIF1Q69YI7 327 aaPredicted RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 TXNDC8Q6A555 127 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 TRIM68Q6AZZ1 485 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PKN3Q6P5Z2 889 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PAOXQ6QHF9 649 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 DGLUCYQ7Z3D6 616 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 BRSK2Q8IWQ3 736 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PDCL2Q8N4E4 241 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 MAB21L3Q8N8X9 362 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 CXorf38Q8TB03 319 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 E2F7Q96AV8 911 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 HVCN1Q96D96 273 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 TSPAN18Q96SJ8 248 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 NT5C1AQ9BXI3 368 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 EPC1Q9H2F5 836 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 TASP1Q9H6P5 420 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PDE11AQ9HCR9 933 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 GKN1Q9NS71 199 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PANK4Q9NVE7 773 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 RBAKQ9NYW8 714 aaPredicted RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 GTF3C4Q9UKN8 822 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PCOLCE2Q9UKZ9 415 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 DSEQ9UL01 958 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 MAGED2Q9UNF1 606 aaPredicted RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 CCL26Q9Y258 94 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 ASB3Q9Y575 518 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 FAM186AA6NE01 2351 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 PTPRJQ12913 1337 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 MYBPHLA2RUH7 354 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 OTOL1A6NHN0 477 aaPredicted RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 K7ESF4 209 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 TADA3O75528 432 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 IL18RAPO95256 599 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 PGRP06401 933 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 KRT19P08727 400 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 H2AFB1P0C5Y9 115 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ARSAP15289 507 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 GAP43P17677 238 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 PDCP20941 246 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 CYP2F1P24903 491 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 CDC25CP30307 473 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ADMP35318 185 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 HOXD13P35453 343 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 CXCL12P48061 93 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 PXNP49023 591 aaPredicted RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 CCR3P51677 355 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 VEPH1Q14D04 833 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SLC39A14Q15043 492 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 POSTNQ15063 836 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 TAF12Q16514 161 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 NKG7Q16617 165 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ARHGAP29Q52LW3 1261 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 PRR23BQ6ZRT6 265 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ITIH5Q86UX2 942 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 DCP1BQ8IZD4 617 aaKnown RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 SYCP3Q8IZU3 236 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 CSGALNACT2Q8N6G5 542 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 OR5B17Q8NGF7 314 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SPPL2BQ8TCT7 592 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 BPIFB1Q8TDL5 484 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 USP13Q92995 863 aaPredicted RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 ZNF560Q96MR9 790 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SLC22A12Q96S37 553 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 CYP2S1Q96SQ9 504 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 MTMR12Q9C0I1 747 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 EBF3Q9H4W6 596 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 C8orf33Q9H7E9 229 aaPredicted RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 CAPN10Q9HC96 672 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 FBRSL1Q9HCM7 1045 aaKnown RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 HPS4Q9NQG7 708 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 C1GALT1Q9NS00 363 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 DDX43Q9NXZ2 648 aaKnown RBP6.67□□□□□ -1.34
NUP88-212ENST00000576708 DLL3Q9NYJ7 618 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 HSFX1Q9UBD0 423 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SEL1LQ9UBV2 794 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SIX4Q9UIU6 781 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 USP18Q9UMW8 372 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 EXOC7Q9UPT5 735 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SNX9Q9Y5X1 595 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 FRYLO94915 3013 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 GVINP1Q7Z2Y8 2422 aa6.67□□□□□ -1.34
NUP88-212ENST00000576708 SPTBN4Q9H254 2564 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 DMXL1Q9Y485 3027 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 ZNF292O60281 2723 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 WDR87Q6ZQQ6 2873 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms