RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DCLK3Q9C098 648 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 TNMDQ9H2S6 317 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 CSNK1G1Q9HCP0 422 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 CD93Q9NPY3 652 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 ELOVL2Q9NXB9 296 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 FBXO2Q9UK22 296 aaPredicted RBP9.48□□□□□ -0.89
SMG6-218ENST00000575454 PCDHA5Q9Y5H7 936 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 TRIP11Q15643 1979 aa9.48□□□□□ -0.89
SMG6-218ENST00000575454 PDCD11Q14690 1871 aaKnown RBP9.47□□□□□ -0.89
SMG6-218ENST00000575454 ACACAQ13085 2346 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CYSRT1A8MQ03 144 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 KCNJ18B7U540 433 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CAPN9O14815 690 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
SMG6-218ENST00000575454 RRP8O43159 456 aaKnown RBP9.47□□□□□ -0.89
SMG6-218ENST00000575454 C1SP09871 688 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 FAM200BP0CF97 657 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 RALAP11233 206 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 RARGP13631 454 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 HNF1BP35680 557 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 GRIA4P48058 902 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CSNK1EP49674 416 aaKnown RBP9.47□□□□□ -0.89
SMG6-218ENST00000575454 CCT8P50990 548 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CYP2J2P51589 502 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 MFAP3P55082 362 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 BNC1Q01954 994 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ARID5AQ03989 594 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ZBTB16Q05516 673 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 BIRC3Q13489 604 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 NCOA4Q13772 614 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PTPRNQ16849 979 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 C10orf120Q5SQS8 335 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 C6orf118Q5T5N4 469 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ANKS1BQ7Z6G8 1248 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ACOT1Q86TX2 421 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ZNF276Q8N554 614 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 GOLGA5Q8TBA6 731 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ZNF507Q8TCN5 953 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SNX19Q92543 992 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 BHMTQ93088 406 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SKA1Q96BD8 255 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 NXPE2Q96DL1 559 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CLIC6Q96NY7 704 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SMOQ99835 787 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SLC2A11Q9BYW1 496 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PANK2Q9BZ23 570 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 FBRSQ9HAH7 460 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PNPLA8Q9NP80 782 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PPP4R2Q9NY27 417 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 FTSJ1Q9UET6 329 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMG6-218ENST00000575454 PLA2G4CQ9UP65 541 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 ANKRD6Q9Y2G4 727 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PCDHGA1Q9Y5H4 931 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 CLIC4Q9Y696 253 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
SMG6-218ENST00000575454 UBE4BO95155 1302 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 PCNX2A6NKB5 2137 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 GON4LQ3T8J9 2241 aa9.47□□□□□ -0.89
SMG6-218ENST00000575454 STX6O43752 255 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 RPN1P04843 607 aaKnown RBP9.46□□□□□ -0.9
SMG6-218ENST00000575454 EPHX1P07099 455 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 JUPP14923 745 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 CD27P26842 260 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 COPAP53621 1224 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 BCAT1P54687 386 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.9
SMG6-218ENST00000575454 GEN1Q17RS7 908 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 FYB2Q5VWT5 728 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 SERPINA13PQ6UXR4 307 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 ZMIZ2Q8NF64 920 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 OR2T3Q8NH03 318 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 BAP1Q92560 729 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 TAF4BQ92750 862 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 TRIM9Q9C026 710 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 CIPCQ9C0C6 399 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 TM9SF3Q9HD45 589 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMG6-218ENST00000575454 PLK2Q9NYY3 685 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 CLIC5Q9NZA1 410 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 NAGPAQ9UK23 515 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.46□□□□□ -0.9
SMG6-218ENST00000575454 SNX11Q9Y5W9 270 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 SPTA1P02549 2419 aa9.46□□□□□ -0.9
SMG6-218ENST00000575454 TSC2P49815 1807 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 A0A1W2PQH9 124 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 FAM149AA5PLN7 773 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 CYP26A1O43174 497 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PAPSS1O43252 624 aaPredicted RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 TGFB1I1O43294 461 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms